RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 C2orf91Q6ZV80 131 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 SPATA12Q7Z6I5 190 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 SGMS2Q8NHU3 365 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 PHOSPHO2Q8TCD6 241 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 PRAP1Q96NZ9 151 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 NMNAT3Q96T66 252 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 FAM215AQ9Y5M1 114 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 TRPM6Q9BX84 2022 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 FLT4P35916 1363 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 ABCC12Q96J65 1359 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 FBN1P35555 2871 aaKnown RBP1.75□□□□□ -2.13
SMC4-215ENST00000484799 TGIF2-C20orf24A0A0A6YYL0 155 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 A0A0J9YX75 114 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 A0A1W2PQD3 144 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 ODF3BA8MYP8 253 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 TXNDC9O14530 226 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 TRAPPC3O43617 180 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 GZMHP20718 246 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 GABRA4P48169 554 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 EMP1P54849 157 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 ERVS71-1P61550 626 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 HIST1H3AP68431 136 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 H3F3AP84243 136 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 TNFAIP8L3Q5GJ75 292 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 ALKAL1Q6UXT8 129 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 TBC1D19Q8N5T2 526 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 OR51D1Q8NGF3 324 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 OR5B17Q8NGF7 314 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 RNASE6Q93091 150 aaKnown RBP1.75□□□□□ -2.13
SMC4-215ENST00000484799 BORCS7Q96B45 105 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 MRPS24Q96EL2 167 aaKnown RBP1.75□□□□□ -2.13
SMC4-215ENST00000484799 PAIP2Q9BPZ3 127 aaKnown RBP1.75□□□□□ -2.13
SMC4-215ENST00000484799 ZNF471Q9BX82 626 aaPredicted RBP1.75□□□□□ -2.13
SMC4-215ENST00000484799 TLNRD1Q9H1K6 362 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 IL20Q9NYY1 176 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 REREQ9P2R6 1566 aa1.75□□□□□ -2.13
SMC4-215ENST00000484799 MYO9BQ13459 2157 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 A8MUN3 132 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 INMT-MINDY4F8WBC2 141 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 BHLHE40O14503 412 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 PLA2G10O15496 165 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 GNRH2O43555 120 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 FADS1O60427 444 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 SRP19P09132 144 aaKnown RBP1.74□□□□□ -2.13
SMC4-215ENST00000484799 FGF6P10767 208 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 CBR1P16152 277 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 HIST1H1TP22492 207 aaPredicted RBP1.74□□□□□ -2.13
SMC4-215ENST00000484799 ALDH3A1P30838 453 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 RAB13P51153 203 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 MIAQ16674 131 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 TMEM97Q5BJF2 176 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 PABPC1L2AQ5JQF8 200 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 LHFPL1Q86WI0 220 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 ZNF675Q8TD23 568 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
SMC4-215ENST00000484799 CMSS1Q9BQ75 279 aaKnown RBP1.74□□□□□ -2.13
SMC4-215ENST00000484799 TRIM4Q9C037 500 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 COMMD5Q9GZQ3 224 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 PRTFDC1Q9NRG1 225 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 GLTPQ9NZD2 209 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 MINOS1-NBL1R4GNA1 71 aa1.74□□□□□ -2.13
SMC4-215ENST00000484799 NUP155O75694 1391 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 MYO16Q9Y6X6 1858 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 DOCK6Q96HP0 2047 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 TRGV5A0A0B4J1U4 118 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 VPS37CA5D8V6 355 aaPredicted RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 SMIM9A6NGZ8 99 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 C11orf86A6NJI1 115 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 KNCNA6PVL3 124 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 NOS1APO75052 506 aaPredicted RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 HAND1O96004 215 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 TTRP02766 147 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 ZNF705DP0CH99 300 aaPredicted RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 ZNF728P0DKX0 622 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 PSMB8P28062 276 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 HSD11B1P28845 292 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 SNRPD2P62316 118 aaKnown RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 RPL30P62888 115 aaKnown RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 GRK1Q15835 563 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 Q6ZS52 159 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 SSX8Q7RTT4 187 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 ZNF283Q8N7M2 679 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 OR4X1Q8NH49 305 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 DNAJC30Q96LL9 226 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 ULBP3Q9BZM4 244 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 DOK5Q9P104 306 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 FBXO5Q9UKT4 447 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 CCL26Q9Y258 94 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 ARL2BPQ9Y2Y0 163 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 NYNRINQ9P2P1 1898 aaKnown RBP1.73□□□□□ -2.13
SMC4-215ENST00000484799 ADGRL3Q9HAR2 1447 aa1.73□□□□□ -2.13
SMC4-215ENST00000484799 SLIT2O94813 1529 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 A0A0J9YW62 118 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 HLA-DRB1P01911 266 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 C1QAP02745 245 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 CA5AP35218 305 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 CSN1S1P47710 185 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 ARF6P62330 175 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 HIST1H4AP62805 103 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms