RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CLVS1Q8IUQ0 354 aaPredicted RBP9.46□□□□□ -0.9
MSH5-216ENST00000484309 LYSMD2Q8IV50 215 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
MSH5-216ENST00000484309 ZBTB34Q8NCN2 500 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
MSH5-216ENST00000484309 TMEM167AQ8TBQ9 72 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 MOB3AQ96BX8 217 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 TMEM68Q96MH6 324 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 CMTM3Q96MX0 182 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 FYTTD1Q96QD9 318 aaKnown RBP9.46□□□□□ -0.9
MSH5-216ENST00000484309 OR2A7Q96R45 310 aa9.46□□□□□ -0.9
MSH5-216ENST00000484309 E7EUB6 86 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 S1PR2O95136 353 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 LY86O95711 162 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 HRASP01112 189 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 TRBV12-3P01733 135 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
MSH5-216ENST00000484309 ZNF45Q02386 682 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 OR4A47Q6IF82 309 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 VSTM2AQ8TAG5 236 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 AP3S1Q92572 193 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 HRASLSQ9HDD0 168 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 EXTL2Q9UBQ6 330 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 ADAM30Q9UKF2 790 aa9.45□□□□□ -0.9
MSH5-216ENST00000484309 TRAV3A0A0B4J244 114 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 A0A0G2JLM5 398 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 A0A1B0GW64 132 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 M0QYG6 137 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
MSH5-216ENST00000484309 TSPAN5P62079 268 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 RHOGP84095 191 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 DHRS11Q6UWP2 260 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 SCPEP1Q9HB40 452 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 AKIP1Q9NQ31 210 aa9.44□□□□□ -0.9
MSH5-216ENST00000484309 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RGS5O15539 181 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RBFOX2O43251 390 aaKnown RBP eCLIP9.43□□□□□ -0.9
MSH5-216ENST00000484309 PGLYRP1O75594 196 aaPredicted RBP9.43□□□□□ -0.9
MSH5-216ENST00000484309 OR2J3O76001 311 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 HPRT1P00492 218 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 REG1AP05451 166 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 AREGP15514 252 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RCVRNP35243 200 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RPL8P62917 257 aaKnown RBP9.43□□□□□ -0.9
MSH5-216ENST00000484309 EXOSC2Q13868 293 aaKnown RBP9.43□□□□□ -0.9
MSH5-216ENST00000484309 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RSRP1Q9BUV0 290 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 MIXL1Q9H2W2 232 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 RANGRFQ9HD47 186 aaPredicted RBP9.43□□□□□ -0.9
MSH5-216ENST00000484309 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 BET1LQ9NYM9 111 aa9.43□□□□□ -0.9
MSH5-216ENST00000484309 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
MSH5-216ENST00000484309 GPR31O00270 319 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 CTDSP2O14595 271 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 ZNF735P0CB33 412 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 NQO2P16083 231 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 HLA-GP17693 338 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 MAS1LP35410 378 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 LPAR6P43657 344 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 TAS2R31P59538 309 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 ZNF343Q6P1L6 599 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 ACSM6Q6P461 480 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 LAX1Q8IWV1 398 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 BORCS5Q969J3 196 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
MSH5-216ENST00000484309 KLK11Q9UBX7 282 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
MSH5-216ENST00000484309 S4R3C0 116 aa9.42□□□□□ -0.9
MSH5-216ENST00000484309 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 CGB1A6NKQ9 187 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 UPK2O00526 184 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 BRI3O95415 125 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 SPNP16150 400 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 ZP3P21754 424 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 F2RP25116 425 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 INSL3P51460 131 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 ATP5G2Q06055 141 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 CD69Q07108 199 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 FCAMRQ8WWV6 532 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 OR4C12Q96R67 309 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 ABHD1Q96SE0 405 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 SLC2A9Q9NRM0 540 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
MSH5-216ENST00000484309 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms