RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SCN2AQ99250 2005 aa1.78□□□□□ -2.13
LAPTM4A-202ENST00000483117 ARHGAP21Q5T5U3 1957 aa1.78□□□□□ -2.13
LAPTM4A-202ENST00000483117 DENND4BO75064 1496 aaPredicted RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 UHRF1BP1Q6BDS2 1440 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 RIIAD1A6NNX1 92 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGLL5B9A064 214 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ARPC5O15511 151 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF207O43670 478 aaKnown RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGHV1-46P01743 117 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 HLA-DQB1P01920 261 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF806P0C7X5 589 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TLX1NBP0CAT3 122 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SMIM10L2AP0DMW4 78 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SMIM10L2BP0DMW5 78 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 GPX2P18283 190 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 S100A1P23297 94 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SDC4P31431 198 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 MPV17P39210 176 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SERPINB10P48595 397 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TBPL1P62380 186 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPS28P62857 69 aaKnown RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SYCNQ0VAF6 134 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TNFAIP8L3Q5GJ75 292 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF678Q5SXM1 525 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 HES3Q5TGS1 186 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 LYRM7Q5U5X0 104 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 CYB5R2Q6BCY4 276 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 LAIR2Q6ISS4 152 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZFP1Q6P2D0 407 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 PRSS54Q6PEW0 395 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 Q6Q795 121 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 WDR86Q86TI4 376 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 C10orf126Q8N4M7 172 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR5A1Q8NGJ0 315 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR13C4Q8NGS5 318 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR2T4Q8NH00 348 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 MBD3L1Q8WWY6 194 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TOMM6Q96B49 74 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 CAPZA3Q96KX2 299 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SPIN2AQ99865 258 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 B9D2Q9BPU9 175 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SPIN2BQ9BPZ2 258 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 NDFIP1Q9BT67 221 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SHANK2-AS3Q9BTD1 123 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 RSPO3Q9BXY4 272 aaPredicted RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 FAM60AQ9NP50 221 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF355PQ9NSJ1 428 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TMEM38BQ9NVV0 291 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 FBXL12Q9NXK8 326 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 RASL12Q9NYN1 266 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 SS18L2Q9UHA2 77 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 KLK5Q9Y337 293 aaPredicted RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAPPC1Q9Y5R8 145 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 C2orf16Q68DN1 1984 aa1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 CHD2O14647 1828 aaKnown RBP1.77□□□□□ -2.13
LAPTM4A-202ENST00000483117 NEO1Q92859 1461 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 ROBO3Q96MS0 1386 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRBV20OR9-2A0A075B6H5 130 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAV9-1A0A075B6T8 112 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRBV6-6A0A0A6YYG2 114 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAV4A0A0B4J268 109 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 A0A1B0GX51 115 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 A0A1W2PQ67 120 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 LST1O00453 97 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 COX7A2LO14548 114 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 NDUFA2O43678 99 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 SULT1C4O75897 302 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 SRP19P09132 144 aaKnown RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TFPTP0C1Z6 253 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR5AC1P0C628 307 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF705DP0CH99 300 aaPredicted RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 CPMP14384 443 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 S100A2P29034 98 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 BLVRBP30043 206 aaPredicted RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 PPP1CCP36873 323 aaKnown RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 CCR6P51684 374 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TPI1P60174 286 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPS20P60866 119 aaKnown RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 DHRS2Q13268 280 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 PDGFRLQ15198 375 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 LINC01551Q86U37 167 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 C1orf174Q8IYL3 243 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 H1FOOQ8IZA3 346 aaPredicted RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPRMLQ8N4K4 120 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 C12orf45Q8N5I9 185 aaPredicted RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 C3orf22Q8N5N4 141 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR4D11Q8NGI4 311 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR5J2Q8NH18 312 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 RAB2BQ8WUD1 216 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 C1orf54Q8WWF1 131 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 ISOC1Q96CN7 298 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 PFDN5Q99471 154 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 DOHHQ9BU89 302 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 WDR61Q9GZS3 305 aaKnown RBP1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TMEM126AQ9H061 195 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 TMEM222Q9H0R3 208 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 CXorf21Q9HAI6 301 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 XAGE1AQ9HD64 81 aa1.76□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF222Q9UK12 451 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms