RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CD3GP09693 182 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 HSMCR30P0CW71 290 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 SRMP19623 302 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 CBLN1P23435 193 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 TMEM50BP56557 158 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 RPP30P78346 268 aaKnown RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 EWSR1Q01844 656 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 VMA21Q3ZAQ7 101 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 RBM48Q5RL73 367 aaKnown RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 CEMP1Q6PRD7 247 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 SLC16A13Q7RTY0 426 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 FAM223AQ8IWN6 122 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 SLC38A6Q8IZM9 456 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 PQLC1Q8N2U9 271 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 FAM89BQ8N5H3 189 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 TEX45Q8NA69 505 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 RNF141Q8WVD5 230 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 SRSF12Q8WXF0 261 aaKnown RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 CACNG8Q8WXS5 425 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 ACOT12Q8WYK0 555 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 THRSPQ92748 146 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 CMSS1Q9BQ75 279 aaKnown RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 URM1Q9BTM9 101 aaKnown RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 GGTLC1Q9BX51 225 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 LPAR5Q9H1C0 372 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 OR2D2Q9H210 308 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 VCXQ9H320 206 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 S100A14Q9HCY8 104 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 SMPD3Q9NY59 655 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 LOC102724200A0A096LPH7 203 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-206ENST00000483030 ZNF320A2RRD8 509 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 XKRY2A2RUG3 117 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 NUPR2A6NF83 97 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 LGALS9O00182 355 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 MYL12BO14950 172 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 GGCTO75223 188 aaKnown RBP5.52□□□□□ -1.53
CSDE1-206ENST00000483030 DEDDO75618 318 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 OR2J3O76001 311 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 ACTL6BO94805 426 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 CD37P11049 281 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 SERPINB10P48595 397 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 WNT4P56705 351 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 UBE2KP61086 200 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 P2RY14Q15391 338 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 RTL8BQ17RB0 113 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 C15orf32Q32M92 178 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 FAM209BQ5JX69 171 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 TTC23Q5W5X9 447 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 ZNF57Q68EA5 555 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-206ENST00000483030 CEACAM19Q7Z692 300 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 TTC9CQ8N5M4 171 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 MS4A15Q8N5U1 240 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 NANOGP1Q8N7R0 232 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 UXS1Q8NBZ7 420 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 NECAP1Q8NC96 275 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 OR52B4Q8NGK2 314 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 CYGBQ8WWM9 190 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 PHYHIPQ92561 330 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 C5orf30Q96GV9 206 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 ARHGAP5-AS1Q96IT6 56 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 SPIN2AQ99865 258 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 SPIN2BQ9BPZ2 258 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 PECRQ9BY49 303 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 HSF4Q9ULV5 492 aa5.52□□□□□ -1.53
CSDE1-206ENST00000483030 LOC100506127A0A0U1RQW1 187 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 HMX3A6NHT5 357 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 FOXI3A8MTJ6 420 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-206ENST00000483030 FABP7O15540 132 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 SCAF4O95104 1147 aaKnown RBP5.51□□□□□ -1.53
CSDE1-206ENST00000483030 NDUFB8O95169 186 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 IGHV3-23P01764 117 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 RRASP10301 218 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 TNFRSF9Q07011 255 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 TPBGQ13641 420 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 ANKRD55Q3KP44 614 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 HSD17B12Q53GQ0 312 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 PLAC9Q5JTB6 97 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 C10orf55Q5SWW7 151 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 SLC25A24Q6NUK1 477 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 AHSA2Q719I0 299 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 LYG2Q86SG7 212 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 CROCCP3Q8IVE0 287 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 SETD9Q8NE22 299 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 OR6M1Q8NGM8 313 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 OR4A4PQ8NGN8 299 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 OR10J5Q8NHC4 309 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 ZNF430Q9H8G1 570 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-206ENST00000483030 PLGRKTQ9HBL7 147 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 MLXQ9UH92 298 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 PSORS1C1Q9UIG5 152 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 FBXL7Q9UJT9 491 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 KLK5Q9Y337 293 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-206ENST00000483030 RBM7Q9Y580 266 aaKnown RBP5.51□□□□□ -1.53
CSDE1-206ENST00000483030 S4R3C0 116 aa5.51□□□□□ -1.53
CSDE1-206ENST00000483030 TRBV6-7A0A0A0MS04 114 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms