RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ALDH3B2P48448 385 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 AADACL3Q5VUY0 350 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF429Q86V71 674 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 SNX29P2Q8IUI4 249 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 OR6F1Q8NGZ6 308 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 CD300LFQ8TDQ1 290 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 ADAM30Q9UKF2 790 aa9.16□□□□□ -0.94
HMGN1-213ENST00000482192 FAM223BA6NKX1 122 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 SAP30O75446 220 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 HPRT1P00492 218 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 HLA-DMAP28067 261 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 RCVRNP35243 200 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 TAS2R31P59538 309 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
HMGN1-213ENST00000482192 OR4A47Q6IF82 309 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 ACSM6Q6P461 480 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 SSX9Q7RTT3 188 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 SLC25A42Q86VD7 318 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 LYSMD2Q8IV50 215 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 FAM223AQ8IWN6 122 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 TTC9CQ8N5M4 171 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 OR51H1Q8NH63 302 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 BET1LQ9NYM9 111 aa9.15□□□□□ -0.94
HMGN1-213ENST00000482192 ZNF256Q9Y2P7 627 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-213ENST00000482192 ANKRD34BA5PLL1 514 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 RLN1P04808 185 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 ZNF735P0CB33 412 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 NQO2P16083 231 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 HLA-GP17693 338 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
HMGN1-213ENST00000482192 TSPAN5P62079 268 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 RHOGP84095 191 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 DEFA5Q01523 94 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 POU2AF1Q16633 256 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 NECAP1Q8NC96 275 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 FYTTD1Q96QD9 318 aaKnown RBP9.14□□□□□ -0.95
HMGN1-213ENST00000482192 PRR25Q96S07 402 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 HRASLSQ9HDD0 168 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 COMMD9Q9P000 198 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
HMGN1-213ENST00000482192 ZNF257Q9Y2Q1 563 aa9.14□□□□□ -0.95
HMGN1-213ENST00000482192 TRBV9A0A0B4J1U6 114 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 DPPA5A6NC42 116 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 HMX3A6NHT5 357 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 TEX22C9J3V5 150 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 GPR31O00270 319 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 RBMXL2O75526 392 aaKnown RBP9.13□□□□□ -0.95
HMGN1-213ENST00000482192 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-213ENST00000482192 TPPPO94811 219 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 PRH1P02810 166 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 FGF2P09038 288 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 ZNF45Q02386 682 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 LPCAT3Q6P1A2 487 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 RAB2BQ8WUD1 216 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 C15orf40Q8WUR7 153 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 OR4C12Q96R67 309 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 ELOVL1Q9BW60 279 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 FXYD6Q9H0Q3 95 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 SLC2A9Q9NRM0 540 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 EXTL2Q9UBQ6 330 aa9.13□□□□□ -0.95
HMGN1-213ENST00000482192 S1PR2O95136 353 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 LY86O95711 162 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 DHFRP00374 187 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 IL6RP08887 468 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 F2RP25116 425 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 S100GP29377 79 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 ERVK-16P61578 105 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 CD69Q07108 199 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 EXOSC2Q13868 293 aaKnown RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 KLF5Q13887 457 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 SPCS2Q15005 226 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 FAM209BQ5JX69 171 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 VAX1Q5SQQ9 334 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 OR6Q1Q8NGQ2 317 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 DGCR14Q96DF8 476 aaKnown RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 BCL7BQ9BQE9 202 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 COMMD5Q9GZQ3 224 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 TMEM140Q9NV12 185 aa9.12□□□□□ -0.95
HMGN1-213ENST00000482192 LSM4Q9Y4Z0 139 aaKnown RBP9.12□□□□□ -0.95
HMGN1-213ENST00000482192 A0A1B0GW64 132 aa9.11□□□□□ -0.95
HMGN1-213ENST00000482192 MARCH11A6NNE9 402 aa9.11□□□□□ -0.95
HMGN1-213ENST00000482192 E7EUB6 86 aa9.11□□□□□ -0.95
HMGN1-213ENST00000482192 UPK2O00526 184 aa9.11□□□□□ -0.95
HMGN1-213ENST00000482192 RGS5O15539 181 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms