RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 FAM90A23PA8MXZ1 464 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 FAM90A15PP0C7V4 464 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 FAM90A13PP0C7W8 464 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 FAM90A14PP0C7W9 464 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 FAM90A24PP0C7X0 464 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 CT45A6P0DMU7 189 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 CT45A5P0DMU8 189 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 CT45A7P0DMV0 189 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 HGFACQ04756 655 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 SELENOHQ8IZQ5 122 aaKnown RBP9.56□□□□□ -0.88
SMPD4-218ENST00000482171 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 TAF15Q92804 592 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMPD4-218ENST00000482171 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 BARX1Q9HBU1 254 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-218ENST00000482171 RFNGQ9Y644 331 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 ANKHD1Q8IWZ3 2542 aaKnown RBP9.56□□□□□ -0.88
SMPD4-218ENST00000482171 DOCK11Q5JSL3 2073 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 WNT5AP41221 380 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 TRBV6-7A0A0A0MS04 114 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 IL18BPO95998 194 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 TGIF2LYQ8IUE0 185 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 OR4X1Q8NH49 305 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 RCC1LQ96I51 464 aaKnown RBP9.56□□□□□ -0.88
SMPD4-218ENST00000482171 HES4Q9HCC6 221 aa9.56□□□□□ -0.88
SMPD4-218ENST00000482171 IGKV3D-15A0A087WSY6 115 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 USF1P22415 310 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-218ENST00000482171 Q56UQ5 140 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 SAXO1Q8IYX7 474 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 VKORC1L1Q8N0U8 176 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 FGFRL1Q8N441 504 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
SMPD4-218ENST00000482171 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 WFDC1Q9HC57 220 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 M0R2Z0 102 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 LILRA1O75019 489 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 GLRXP35754 106 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 RHOBP62745 196 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 CTAG1AP78358 180 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 SPACA3Q8IXA5 215 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 OR4P4Q8NGL7 312 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 P2RX4Q99571 388 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 CFPP27918 469 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 TNXAQ16473 311 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 KIAA1644Q3SXP7 199 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 HIST3H2BBQ8N257 126 aa9.55□□□□□ -0.88
SMPD4-218ENST00000482171 ERVFRD-1P60508 538 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
SMPD4-218ENST00000482171 HIST3H3Q16695 136 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 DRAM1Q8N682 238 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 TMEM56Q96MV1 263 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 CALYQ9NYX4 217 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 ALPK3Q96L96 1907 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 IGHV3-21A0A0B4J1V1 117 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 C12orf77C9JDV5 145 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 H0Y980 276 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 PDE6DO43924 150 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 KBTBD11O94819 623 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 CD40P25942 277 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 MST1LQ2TV78 715 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 MARS2Q96GW9 593 aaKnown RBP9.54□□□□□ -0.88
SMPD4-218ENST00000482171 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 CSPG4Q6UVK1 2322 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 A0A087WWC5 75 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 COX7A2P2O60397 106 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 KIR2DL2P43627 348 aaPredicted RBP9.54□□□□□ -0.88
SMPD4-218ENST00000482171 ICAM4Q14773 271 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 PSG5Q15238 335 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 ZNF835Q9Y2P0 537 aa9.54□□□□□ -0.88
SMPD4-218ENST00000482171 RBP4P02753 201 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 FCER1GP30273 86 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 BRS3P32247 399 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 NTF4P34130 210 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 FAM216BQ8N7L0 139 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 CLDND2Q8NHS1 167 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 FAM57AQ8TBR7 257 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 INSIG2Q9Y5U4 225 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PRRC2CQ9Y520 2896 aaKnown RBP9.53□□□□□ -0.88
SMPD4-218ENST00000482171 K7N7A8 449 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 SS18L1O75177 396 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-218ENST00000482171 S1PR2O95136 353 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PAFAH1B2P68402 229 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 SPATA45Q537H7 98 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PLA2G2CQ5R387 149 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 GTF2H5Q6ZYL4 71 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 FAM89BQ8N5H3 189 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PLPPR1Q8TBJ4 325 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PTPRSQ13332 1948 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 IGKV1D-13A0A0B4J2D9 117 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 DBX1A6NMT0 343 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 CSN3P07498 182 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 IGKV1-13P0DP09 117 aa9.53□□□□□ -0.88
SMPD4-218ENST00000482171 SRP14P37108 136 aaKnown RBP9.53□□□□□ -0.88
SMPD4-218ENST00000482171 PRRX1P54821 245 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms