RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, human

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCB-215	ENST00000482086	IL6R	P08887	468 aa	Predicted RBP	11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	TMEM11	P17152	192 aa		11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	IL15RA	Q13261	267 aa		11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	VKORC1L1	Q8N0U8	176 aa		11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	NPB	Q8NG41	125 aa		11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	TMEM167A	Q8TBQ9	72 aa		11.72	□□□□□ -0.53
PCCB-215	ENST00000482086	SON	P18583	2426 aa	Known RBP	11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	UPK2	O00526	184 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	ST8SIA3	O43173	380 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	LY86	O95711	162 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	C1QB	P02746	253 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	CD99	P14209	185 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	SRP14	P37108	136 aa	Known RBP	11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	PSG5	Q15238	335 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	AARD	Q4LEZ3	155 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	FAM120AOS	Q5T036	256 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086		Q6ZRM9	215 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	ZNF429	Q86V71	674 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	SSX3	Q99909	188 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	TMUB1	Q9BVT8	246 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	PITPNC1	Q9UKF7	332 aa		11.71	□□□□□ -0.53
PCCB-215	ENST00000482086	MXRA5	Q9NR99	2828 aa		11.71	□□□□□ -0.54
PCCB-215	ENST00000482086	HIVEP2	P31629	2446 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	C15orf61	A6NNL5	157 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	WRB	O00258	174 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	RRH	O14718	337 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	NBR2	O15453	112 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	SLC25A17	O43808	307 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	NDUFA3	O95167	84 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	MPC2	O95563	127 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	SCGB1D2	O95969	90 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	OR9G9	P0C7N8	305 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	PVALB	P20472	110 aa	Predicted RBP	11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	MAS1L	P35410	378 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	RELB	Q01201	579 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	ID3	Q02535	119 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	MMD	Q15546	238 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	IZUMO4	Q1ZYL8	232 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	ZFP69	Q49AA0	526 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	MMD2	Q8IY49	270 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086		Q8N6K4	173 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	OR52E5	Q8NH55	327 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	THAP6	Q8TBB0	222 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	TMEM14B	Q9NUH8	114 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	FOXA2	Q9Y261	457 aa	Predicted RBP	11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	ZNF257	Q9Y2Q1	563 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	POMT1	Q9Y6A1	747 aa		11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	TET2	Q6N021	2002 aa	Predicted RBP	11.7	□□□□□ -0.54
PCCB-215	ENST00000482086	MBP	P02686	304 aa	Predicted RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PAX6	P26367	422 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	S100A10	P60903	97 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	RPL8	P62917	257 aa	Known RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	TNFRSF9	Q07011	255 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	RAB32	Q13637	225 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	HNF4G	Q14541	408 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PLGLA	Q15195	96 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	ZDHHC16	Q969W1	377 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	RITA1	Q96K30	269 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	HYLS1	Q96M11	299 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	METTL1	Q9UBP6	276 aa	Known RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	HSPB7	Q9UBY9	170 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	SIGLEC9	Q9Y336	463 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PLXNB1	O43157	2135 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	BTBD17	A6NE02	478 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	ACTL6B	O94805	426 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	IFNA17	P01571	189 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	CRYGB	P07316	175 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	SLC25A4	P12235	298 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	CD24	P25063	80 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	SPCS3	P61009	180 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	HSPE1	P61604	102 aa	Known RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	DEFB112	Q30KQ8	113 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	LRRC37A5P	Q49AS3	106 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	C11orf87	Q6NUJ2	197 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PRSS54	Q6PEW0	395 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	C16orf82	Q7Z2V1	217 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PPP1R27	Q86WC6	154 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	OR5B3	Q8NH48	314 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	OR5R1	Q8NH85	324 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	RAB40C	Q96S21	281 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	CLCC1	Q96S66	551 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	COMMD5	Q9GZQ3	224 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	PRDM13	Q9H4Q3	707 aa		11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	LSM5	Q9Y4Y9	91 aa	Known RBP	11.69	□□□□□ -0.54
PCCB-215	ENST00000482086	SVEP1	Q4LDE5	3571 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	NCBP2L	A6PVI3	153 aa	Known RBP	11.68	□□□□□ -0.54
PCCB-215	ENST00000482086		K7EPK0	472 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	SYNGR2	O43760	224 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	DEDD	O75618	318 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	CD300C	Q08708	224 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	C5orf64	Q2M2E5	130 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	FAM71E2	Q8N5Q1	922 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	OR1L8	Q8NGR8	309 aa		11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	WDR89	Q96FK6	387 aa	Predicted RBP	11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	RBM14	Q96PK6	669 aa	Known RBP	11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	CIB3	Q96Q77	187 aa	Predicted RBP	11.68	□□□□□ -0.54
PCCB-215	ENST00000482086	QTRT1	Q9BXR0	403 aa	Known RBP	11.68	□□□□□ -0.54

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