RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
SYNE1-225ENST00000481502 LINC00205P59089 165 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 RPL8P62917 257 aaKnown RBP6.6□□□□□ -1.35
SYNE1-225ENST00000481502 PRB3Q04118 309 aaPredicted RBP6.6□□□□□ -1.35
SYNE1-225ENST00000481502 FGL1Q08830 312 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 IL15RAQ13261 267 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 HES1Q14469 280 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 SMCO1Q147U7 214 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 PSG5Q15238 335 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 MMDQ15546 238 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 LYZL2Q7Z4W2 148 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 FAM71E2Q8N5Q1 922 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 OR52B4Q8NGK2 314 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 RNASE11Q8TAA1 199 aaKnown RBP6.6□□□□□ -1.35
SYNE1-225ENST00000481502 C17orf50Q8WW18 174 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 C2orf50Q96LR7 162 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 GPHA2Q96T91 129 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 RANBP3Q9H6Z4 567 aaPredicted RBP6.6□□□□□ -1.35
SYNE1-225ENST00000481502 PLSCR3Q9NRY6 295 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 TMEM140Q9NV12 185 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 VPREB3Q9UKI3 123 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 SIGLEC9Q9Y336 463 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 MOB4Q9Y3A3 225 aa6.6□□□□□ -1.35
SYNE1-225ENST00000481502 AKAP9Q99996 3911 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 IGHV3OR16-10A0A075B7F0 116 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 C15orf61A6NNL5 157 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 H3BUX3 64 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 KCNAB3O43448 404 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 TSPAN9O75954 239 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 SCAF4O95104 1147 aaKnown RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 HLA-DRB1P01911 266 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 HOXB5P09067 269 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 GIPP09681 153 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 PET100P0DJ07 73 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 SAA1P0DJI8 122 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 G6PCP35575 357 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 BCAP31P51572 246 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 HILS1P60008 231 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 SPCS3P61009 180 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 RAP2BP61225 183 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 HSPE1P61604 102 aaKnown RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 RELBQ01201 579 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 ID3Q02535 119 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 PRSS8Q16651 343 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 BCL6BQ8N143 479 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 Q8N9W7 124 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 OR4A16Q8NH70 328 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 GPR146Q96CH1 333 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 FYTTD1Q96QD9 318 aaKnown RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 RASL11BQ9BPW5 248 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 COMMD5Q9GZQ3 224 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 TMEM14BQ9NUH8 114 aa6.59□□□□□ -1.35
SYNE1-225ENST00000481502 FOXA2Q9Y261 457 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-225ENST00000481502 MAST4O15021 2626 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 IGHV3-72A0A0B4J1Y9 119 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 A0A1W2PN81 502 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 NCBP2LA6PVI3 153 aaKnown RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 ADAP1O75689 374 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 ACTL6BO94805 426 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 RLN2P04090 185 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 CHRNA7P36544 502 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 CRIP2P52943 208 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 TAS2R30P59541 319 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 IAH1Q2TAA2 248 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 OR2B11Q5JQS5 317 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 NOXA1Q86UR1 476 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 C5orf56Q8N8D9 126 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 ZBTB8BQ8NAP8 495 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 UXS1Q8NBZ7 420 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 OR4D5Q8NGN0 318 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 OR1L8Q8NGR8 309 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 SMR3AQ99954 134 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 SLC25A33Q9BSK2 321 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 ZNF436Q9C0F3 470 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 MGAT4CQ9UBM8 478 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 METTL1Q9UBP6 276 aaKnown RBP6.58□□□□□ -1.36
SYNE1-225ENST00000481502 HSPB7Q9UBY9 170 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 MTORP42345 2549 aa6.58□□□□□ -1.36
SYNE1-225ENST00000481502 GOSR2O14653 212 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 ST8SIA3O43173 380 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 SLC25A17O43808 307 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 BRI3O95415 125 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 IGHG2P01859 326 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
SYNE1-225ENST00000481502 NKX2-1P43699 371 aaPredicted RBP6.57□□□□□ -1.36
SYNE1-225ENST00000481502 F2RL1P55085 397 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 H2BFSP57053 126 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 PRCDQ00LT1 54 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 TMEM267Q0VDI3 215 aaPredicted RBP6.57□□□□□ -1.36
SYNE1-225ENST00000481502 PLGLAQ15195 96 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 FCN2Q15485 313 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 SIGLECL1Q8N7X8 197 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 OR11H7Q8NGC8 314 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms