RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PRR25Q96S07 402 aa13.08□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-209ENST00000480900 ADAM30Q9UKF2 790 aa13.08□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-209ENST00000480900 SULT1C2O00338 296 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 HPGDSO60760 199 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 PMP2P02689 132 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 GNRHRP30968 328 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 GPR107Q5VW38 600 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 SLC25A42Q86VD7 318 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 LYSMD2Q8IV50 215 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 TTC9CQ8N5M4 171 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 OR4A5Q8NH83 315 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 B9D2Q9BPU9 175 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 BET1LQ9NYM9 111 aa13.07□□□□□ -0.32
HSPG2-209ENST00000480900 TRBV9A0A0B4J1U6 114 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 ANKRD34BA5PLL1 514 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 FAM223BA6NKX1 122 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
HSPG2-209ENST00000480900 HPRT1P00492 218 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-209ENST00000480900 HRH1P35367 487 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
HSPG2-209ENST00000480900 ALDH3B2P48448 385 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 TAS2R31P59538 309 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
HSPG2-209ENST00000480900 RHOGP84095 191 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 DEFA5Q01523 94 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 POU2AF1Q16633 256 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 AADACL3Q5VUY0 350 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 SNX29P2Q8IUI4 249 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 FAM223AQ8IWN6 122 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 OR51H1Q8NH63 302 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
HSPG2-209ENST00000480900 LSM4Q9Y4Z0 139 aaKnown RBP13.06□□□□□ -0.32
HSPG2-209ENST00000480900 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF735P0CB33 412 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 NQO2P16083 231 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 HLA-DMAP28067 261 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 RCVRNP35243 200 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 ZNF45Q02386 682 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 CD69Q07108 199 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 OR4A47Q6IF82 309 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 GPR141Q7Z602 305 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 NECAP1Q8NC96 275 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 OR6Q1Q8NGQ2 317 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 OR6F1Q8NGZ6 308 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 OR4C12Q96R67 309 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 PLEKHA2Q9HB19 425 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 COMMD9Q9P000 198 aa13.05□□□□□ -0.32
HSPG2-209ENST00000480900 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
HSPG2-209ENST00000480900 A0A1B0GW64 132 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 HMX3A6NHT5 357 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 NPIPB5A8MRT5 1133 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FAM25AB3EWG3 89 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FAM25CB3EWG5 89 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FAM25GB3EWG6 89 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 PRH1P02810 166 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FGF2P09038 288 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 HLA-GP17693 338 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 KLF5Q13887 457 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-209ENST00000480900 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FYTTD1Q96QD9 318 aaKnown RBP13.04□□□□□ -0.32
HSPG2-209ENST00000480900 FXYD6Q9H0Q3 95 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 HRASLSQ9HDD0 168 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 SLC2A9Q9NRM0 540 aa13.04□□□□□ -0.32
HSPG2-209ENST00000480900 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 E7EUB6 86 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 GPR31O00270 319 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 PGLYRP1O75594 196 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-209ENST00000480900 TPPPO94811 219 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 LY86O95711 162 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 RLN1P04808 185 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 TSPAN5P62079 268 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 ATP5G2Q06055 141 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
HSPG2-209ENST00000480900 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
HSPG2-209ENST00000480900 UPK2O00526 184 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 S1PR2O95136 353 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 TRBV12-3P01733 135 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 CRYGCP07315 174 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 SPNP16150 400 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 F2RP25116 425 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 ERVK-16P61578 105 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 LPCAT3Q6P1A2 487 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 DMBX1Q8NFW5 382 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
HSPG2-209ENST00000480900 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
HSPG2-209ENST00000480900 DHFRP00374 187 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 AREGP15514 252 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 PSMB6P28072 239 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 SYNJ2BPP57105 145 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 RPEL1Q2QD12 228 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms