RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 EXOSC2Q13868 293 aaKnown RBP8.79□□□□□ -1
CCM2-213ENST00000480658 SECTM1Q8WVN6 248 aa8.79□□□□□ -1
CCM2-213ENST00000480658 AP3S1Q92572 193 aa8.79□□□□□ -1
CCM2-213ENST00000480658 CXorf58Q96LI9 332 aa8.79□□□□□ -1
CCM2-213ENST00000480658 SLC2A9Q9NRM0 540 aa8.79□□□□□ -1
CCM2-213ENST00000480658 COMMD9Q9P000 198 aa8.79□□□□□ -1
CCM2-213ENST00000480658 ELF5Q9UKW6 265 aaPredicted RBP8.79□□□□□ -1
CCM2-213ENST00000480658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.78□□□□□ -1
CCM2-213ENST00000480658 ANKRD34BA5PLL1 514 aa8.78□□□□□ -1
CCM2-213ENST00000480658 C3orf84H3BNL1 204 aa8.78□□□□□ -1
CCM2-213ENST00000480658 ZNF735P0CB33 412 aa8.78□□□□□ -1
CCM2-213ENST00000480658 DEFA4P12838 97 aa8.78□□□□□ -1
CCM2-213ENST00000480658 SYNJ2BPP57105 145 aa8.78□□□□□ -1
CCM2-213ENST00000480658 ERVK-16P61578 105 aa8.78□□□□□ -1
CCM2-213ENST00000480658 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
CCM2-213ENST00000480658 POU2AF1Q16633 256 aa8.78□□□□□ -1
CCM2-213ENST00000480658 C15orf32Q32M92 178 aa8.78□□□□□ -1
CCM2-213ENST00000480658 C11orf87Q6NUJ2 197 aa8.78□□□□□ -1
CCM2-213ENST00000480658 LPCAT3Q6P1A2 487 aa8.78□□□□□ -1
CCM2-213ENST00000480658 SPAG16Q8N0X2 631 aa8.78□□□□□ -1
CCM2-213ENST00000480658 PUSL1Q8N0Z8 303 aaKnown RBP8.78□□□□□ -1
CCM2-213ENST00000480658 CADM3Q8N126 398 aa8.78□□□□□ -1
CCM2-213ENST00000480658 C15orf40Q8WUR7 153 aa8.78□□□□□ -1
CCM2-213ENST00000480658 SLC25A46Q96AG3 418 aa8.78□□□□□ -1
CCM2-213ENST00000480658 COMMD5Q9GZQ3 224 aa8.78□□□□□ -1
CCM2-213ENST00000480658 SLC5A7Q9GZV3 580 aa8.78□□□□□ -1
CCM2-213ENST00000480658 PLEKHA2Q9HB19 425 aa8.78□□□□□ -1
CCM2-213ENST00000480658 SCPEP1Q9HB40 452 aa8.78□□□□□ -1
CCM2-213ENST00000480658 HRASLSQ9HDD0 168 aa8.78□□□□□ -1
CCM2-213ENST00000480658 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 IGKV1D-13A0A0B4J2D9 117 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 GGCTO75223 188 aaKnown RBP8.77□□□□□ -1.01
CCM2-213ENST00000480658 CRYGCP07315 174 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 IGKV1-13P0DP09 117 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 HLA-GP17693 338 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 PRSS3P35030 304 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 OR2B11Q5JQS5 317 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 OR4A47Q6IF82 309 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 SAMD12Q8N8I0 201 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 OR5H6Q8NGV6 325 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 OR5H2Q8NGV7 314 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 FYTTD1Q96QD9 318 aaKnown RBP8.77□□□□□ -1.01
CCM2-213ENST00000480658 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 FAM212BQ9NTI7 297 aaPredicted RBP8.77□□□□□ -1.01
CCM2-213ENST00000480658 TECRQ9NZ01 308 aaKnown RBP8.77□□□□□ -1.01
CCM2-213ENST00000480658 EHFQ9NZC4 300 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 ADAM30Q9UKF2 790 aa8.77□□□□□ -1.01
CCM2-213ENST00000480658 J3QRK9 145 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 LGALS9O00182 355 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 APOA1P02647 267 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 FRMD6-AS1P0C7T7 363 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 PSMB6P28072 239 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 RPL30P62888 115 aaKnown RBP8.76□□□□□ -1.01
CCM2-213ENST00000480658 MRGPRG-AS1Q2M3A8 158 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 AADACL3Q5VUY0 350 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 DHRS11Q6UWP2 260 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 DMBX1Q8NFW5 382 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 OR6F1Q8NGZ6 308 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 ATP6V0BQ99437 205 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 TSC22D3Q99576 134 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 SLC2A8Q9NY64 477 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 FKBP11Q9NYL4 201 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
CCM2-213ENST00000480658 TEX22C9J3V5 150 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 SULT1C2O00338 296 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 TPPPO94811 219 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 APELAP0DMC3 54 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 TAS2R20P59543 309 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 FXYD4P59646 89 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 FAM106AQ4KMX7 169 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 MZT2AQ6P582 158 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 TMEM17Q86X19 198 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 MOB3AQ96BX8 217 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 YIPF6Q96EC8 236 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 QTRT1Q9BXR0 403 aaKnown RBP8.75□□□□□ -1.01
CCM2-213ENST00000480658 RNF167Q9H6Y7 350 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 CCL28Q9NRJ3 127 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 FBXL7Q9UJT9 491 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 ANAPC10Q9UM13 185 aa8.75□□□□□ -1.01
CCM2-213ENST00000480658 MARCH11A6NNE9 402 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 GPR31O00270 319 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 TNFSF12O43508 249 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 CTRB1P17538 263 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 NAT1P18440 290 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 F2RP25116 425 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 RPS19P39019 145 aaKnown RBP8.74□□□□□ -1.01
CCM2-213ENST00000480658 RORCP51449 518 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 TSPAN5P62079 268 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 CTRB2Q6GPI1 263 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 ZNF818PQ6ZRF7 136 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 VKORC1L1Q8N0U8 176 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms