RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 DCUN1D5Q9BTE7 237 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 PECRQ9BY49 303 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 MRPL27Q9P0M9 148 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 FBXL17Q9UF56 701 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 RBM7Q9Y580 266 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 TRBV6-7A0A0A0MS04 114 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 NPIPB5A8MRT5 1133 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 TEX22C9J3V5 150 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 MRPS14O60783 128 aaKnown RBP8.34□□□□□ -1.07
TTC28-206ENST00000480563 CLEC3BP05452 202 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 GSTT2BP0CG30 244 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 CD37P11049 281 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 FCGR2BP31994 310 aaPredicted RBP8.34□□□□□ -1.07
TTC28-206ENST00000480563 TCTAP57738 103 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 P2RY14Q15391 338 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
TTC28-206ENST00000480563 SPHARQ15513 63 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 UFD1Q92890 307 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 SPAG8Q99932 426 aaPredicted RBP8.34□□□□□ -1.07
TTC28-206ENST00000480563 YTHDF1Q9BYJ9 559 aaKnown RBP8.34□□□□□ -1.07
TTC28-206ENST00000480563 MFFQ9GZY8 342 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 OR51E2Q9H255 320 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 DUSP21Q9H596 190 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 MAP6D1Q9H9H5 199 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 SLC2A9Q9NRM0 540 aa8.34□□□□□ -1.07
TTC28-206ENST00000480563 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 E7EUB6 86 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 CRYGCP07315 174 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 IL6RP08887 468 aaPredicted RBP8.33□□□□□ -1.08
TTC28-206ENST00000480563 GALP22466 123 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 TBCEQ15813 527 aaPredicted RBP8.33□□□□□ -1.08
TTC28-206ENST00000480563 ODF3L2Q3SX64 289 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 LINC00336Q6ZUF6 198 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 ZNF367Q7RTV3 350 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 MS4A15Q8N5U1 240 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 FYTTD1Q96QD9 318 aaKnown RBP8.33□□□□□ -1.08
TTC28-206ENST00000480563 RARRES2Q99969 163 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 CABLES2Q9BTV7 478 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 UFC1Q9Y3C8 167 aa8.33□□□□□ -1.08
TTC28-206ENST00000480563 TRBV7-1A0A0A6YYK4 115 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 TSPAN4O14817 238 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 XRCC3O43542 346 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 FCGR3BO75015 233 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 DHFRP00374 187 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 HSMCR30P0CW71 290 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 AREGP15514 252 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 HIST1H1BP16401 226 aaKnown RBP8.32□□□□□ -1.08
TTC28-206ENST00000480563 PSMA1P25786 263 aaKnown RBP8.32□□□□□ -1.08
TTC28-206ENST00000480563 PSMB6P28072 239 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 RPL27AP46776 148 aaKnown RBP8.32□□□□□ -1.08
TTC28-206ENST00000480563 ELLP55199 621 aaPredicted RBP8.32□□□□□ -1.08
TTC28-206ENST00000480563 MRPS15P82914 257 aaKnown RBP8.32□□□□□ -1.08
TTC28-206ENST00000480563 TRAM1Q15629 374 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 KLK9Q2XQG4 91 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 HSD17B12Q53GQ0 312 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 VKORC1L1Q8N0U8 176 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 OR56B1Q8NGI3 324 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 OR5B3Q8NH48 314 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 FCGR1BQ92637 280 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 GINS4Q9BRT9 223 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 PLGRKTQ9HBL7 147 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 VCX3AQ9NNX9 186 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 KLK9Q9UKQ9 250 aa8.32□□□□□ -1.08
TTC28-206ENST00000480563 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 A0A1B0GW64 132 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 MFSD2BA6NFX1 497 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 IGLL5B9A064 214 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 S1PR2O95136 353 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 DIRAS3O95661 229 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 FCGR3AP08637 254 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 ZNF735P0CB33 412 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 DEFA4P12838 97 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 MYOD1P15172 320 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 MLLT11Q13015 90 aaPredicted RBP8.31□□□□□ -1.08
TTC28-206ENST00000480563 IRF3Q14653 427 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 OR2B11Q5JQS5 317 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 CXorf58Q96LI9 332 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 OR2A7Q96R45 310 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 APLNQ9ULZ1 77 aa8.31□□□□□ -1.08
TTC28-206ENST00000480563 LSM2Q9Y333 95 aaKnown RBP8.31□□□□□ -1.08
TTC28-206ENST00000480563 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 MPTX1A8MV57 137 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 J3QRK9 145 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 SLC17A2O00624 439 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 KBTBD11O94819 623 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 GPR183P32249 361 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 MAS1LP35410 378 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms