RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZNF736B4DX44 427 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 BET1O15155 118 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 PPYP01298 95 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 IGLV2-23P01705 113 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 IGKV1-16P04430 117 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR8U9P0C7N5 309 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 RPA2P15927 270 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 CD40LGP29965 261 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 RCVRNP35243 200 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR3A3P47888 321 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 F2RL1P55085 397 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 TAS2R31P59538 309 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 CX3CL1P78423 397 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 KIAA0141Q14154 515 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 CDK10Q15131 360 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 PSG5Q15238 335 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SURF2Q15527 256 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 LTC4SQ16873 150 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 VMA21Q3ZAQ7 101 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 IGSF11Q5DX21 431 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 CXorf66Q5JRM2 361 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF695Q8IW36 515 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SAMD12Q8N8I0 201 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR5H6Q8NGV6 325 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR8U1Q8NH10 309 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR4S2Q8NH73 311 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SNAPC3Q92966 411 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 MOB3AQ96BX8 217 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 USMG5Q96IX5 58 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SPIN2AQ99865 258 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SPIN2BQ9BPZ2 258 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SOSTQ9BQB4 213 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 PARP12Q9H0J9 701 aaKnown RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 OR2D2Q9H210 308 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 KCNK15Q9H427 330 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 TNFRSF19Q9NS68 423 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SLC35D1Q9NTN3 355 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 BET1LQ9NYM9 111 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 SIGLEC8Q9NYZ4 499 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 COMMD9Q9P000 198 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 NDUFA13Q9P0J0 144 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 RBMX2Q9Y388 322 aaKnown RBP3.82□□□□□ -1.8
PTCD3-213ENST00000480102 IGKV1D-8A0A087WSZ0 117 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 A0A0B4J203 849 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 A0A0G2JLM5 398 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 TCRBV4S1A1TA0A5B7 111 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 NPIPB5A8MRT5 1133 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 INS-IGF2F8WCM5 200 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 GABARAPH6UMI1 98 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 I3L521 148 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 RAMP3O60896 148 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 HPRT1P00492 218 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 HRASP01112 189 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 CD74P04233 296 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 CD28P10747 220 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 CD24P25063 80 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 PAX6P26367 422 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 S100GP29377 79 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 REG1BP48304 166 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 TAS2R20P59543 309 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 RND3P61587 244 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 VBP1P61758 197 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 NCS1P62166 190 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 MXD1Q05195 221 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 CATR1Q13166 79 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 PRSS8Q16651 343 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 AARDQ4LEZ3 155 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 RPL39P5Q59GN2 51 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 FAM131AQ6UXB0 335 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 KCTD9Q7L273 389 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 SLC25A42Q86VD7 318 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 LHFPL1Q86WI0 220 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 MMD2Q8IY49 270 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 CMTM1Q8IZ96 169 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 PUSL1Q8N0Z8 303 aaKnown RBP3.81□□□□□ -1.8
PTCD3-213ENST00000480102 OR6F1Q8NGZ6 308 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 SETD6Q8TBK2 473 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 ZFAND1Q8TCF1 268 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 NUDCD2Q8WVJ2 157 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 ARPC1AQ92747 370 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 R3HDM4Q96D70 268 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 TSC22D3Q99576 134 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 ST6GALNAC5Q9BVH7 336 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 RNF167Q9H6Y7 350 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 SLC2A8Q9NY64 477 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 METTL1Q9UBP6 276 aaKnown RBP3.81□□□□□ -1.8
PTCD3-213ENST00000480102 MTFP1Q9UDX5 166 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF230Q9UIE0 474 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-213ENST00000480102 FOXA2Q9Y261 457 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-213ENST00000480102 VSIG4Q9Y279 399 aa3.81□□□□□ -1.8
PTCD3-213ENST00000480102 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 NOTCH1P46531 2555 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 TRBV9A0A0B4J1U6 114 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 IGHV3-72A0A0B4J1Y9 119 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 TRAV41A0A0B4J266 112 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 IGKV1D-13A0A0B4J2D9 117 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 PGPEP1LA6NFU8 196 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms