RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 POLDIP2Q9Y2S7 368 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 PRR14LQ5THK1 2151 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 ATOH7Q8N100 152 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 DCTN5Q9BTE1 182 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 WNT10AQ9GZT5 417 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 FCGR3BO75015 233 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 CXorf1O96002 111 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 STAG3L2P0CL84 134 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 STAG3L3P0CL85 134 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 ERVK11-1P61568 191 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 SUMO1P63165 101 aaKnown RBP17.24■□□□□ 0.35
COL13A1-208ENST00000479733 Q6ZVH6 145 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 TXN2Q99757 166 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 ZNF586Q9NXT0 402 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 MRPS17Q9Y2R5 130 aaKnown RBP17.24■□□□□ 0.35
COL13A1-208ENST00000479733 MAGEA5P43359 124 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 LGALS4P56470 323 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 FXYD3Q14802 87 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 STPG4Q8N801 248 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 ZBTB34Q8NCN2 500 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 RAB1CQ92928 201 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 RCHY1Q96PM5 261 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 PHF7Q9BWX1 381 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-208ENST00000479733 GPX1P07203 203 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 CLDN18P56856 261 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 EIF4EBP1Q13541 118 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-208ENST00000479733 PRAMEF5Q5TYX0 476 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 PRAMEF6Q5VXH4 476 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 Q6ZR03 302 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 GGTLC1Q9BX51 225 aa17.23■□□□□ 0.35
COL13A1-208ENST00000479733 A8MXE2 369 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 ACTL6BO94805 426 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 CFIP05156 583 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 ZNF146Q15072 292 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 RPEL1Q2QD12 228 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 STARD4Q96DR4 205 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 SLC35E1Q96K37 410 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 NRN1Q9NPD7 142 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 Q6ZN92 141 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 DOLPP1Q86YN1 238 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 FAM19A2Q8N3H0 131 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 UHRF2Q96PU4 802 aa17.22■□□□□ 0.35
COL13A1-208ENST00000479733 TNRC6BQ9UPQ9 1833 aaKnown RBP17.22■□□□□ 0.35
COL13A1-208ENST00000479733 ASPHD1Q5U4P2 390 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 LYSMD4Q5XG99 296 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 Q8IYB0 196 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 TAAR6Q96RI8 345 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 RNASE7Q9H1E1 156 aaKnown RBP17.21■□□□□ 0.35
COL13A1-208ENST00000479733 BOKQ9UMX3 212 aaPredicted RBP17.21■□□□□ 0.35
COL13A1-208ENST00000479733 ZFP30Q9Y2G7 519 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 ESDP10768 282 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 GCHFRP30047 84 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 OPRK1P41145 380 aa17.21■□□□□ 0.35
COL13A1-208ENST00000479733 TRAV3A0A0B4J244 114 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OR4P4Q8NGL7 312 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OR4A16Q8NH70 328 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 DSPP15924 2871 aaKnown RBP17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OOEPA6NGQ2 149 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 ZNF718Q3SXZ3 478 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 MRPL52Q86TS9 123 aaKnown RBP17.2■□□□□ 0.34
COL13A1-208ENST00000479733 Q8N976 141 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 COQ2Q96H96 371 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 EAF1Q96JC9 268 aaPredicted RBP17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OBP2BQ9NPH6 170 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 METRNQ9UJH8 293 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 LOXL2Q9Y4K0 774 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 ZNF253O75346 499 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 CGAP01215 116 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 CRYABP02511 175 aaKnown RBP17.2■□□□□ 0.34
COL13A1-208ENST00000479733 NTF3P20783 257 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 FOXF2Q12947 444 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 MRPL54Q6P161 138 aaKnown RBP17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OR4B1Q8NGF8 309 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 OR13A1Q8NGR1 328 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 RNF2Q99496 336 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 ZNF576Q9H609 170 aa17.2■□□□□ 0.34
COL13A1-208ENST00000479733 CXCL12P48061 93 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 EDDM3AQ14507 147 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 OR1C1Q15619 314 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 GNG10P50151 68 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 MAJINQ3KP22 176 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 C1orf174Q8IYL3 243 aa17.19■□□□□ 0.34
COL13A1-208ENST00000479733 OR5G3P0C626 314 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 Q0VG73 95 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 EFNB3Q15768 340 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 PQLC2Q6ZP29 291 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 ZNF703Q9H7S9 590 aaPredicted RBP17.18■□□□□ 0.34
COL13A1-208ENST00000479733 V9GYV3 84 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 HCFC1P51610 2035 aa17.18■□□□□ 0.34
COL13A1-208ENST00000479733 HYPMO75409 117 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 NDUFB8O95169 186 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 CRYBB3P26998 211 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 HNRNPA3P51991 378 aaKnown RBP17.17■□□□□ 0.34
COL13A1-208ENST00000479733 A0A1W2PS18 150 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 SRIP30626 198 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 ZNF83P51522 516 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 TMEM249Q2WGJ8 235 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 CENPWQ5EE01 88 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 SLC25A40Q8TBP6 338 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms