RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TNFSF10P50591 281 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 ARG2P78540 354 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 ZNF766Q5HY98 468 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 MOB1BQ7L9L4 216 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 SLC25A40Q8TBP6 338 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 F6UZH7 168 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 M0R296 226 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 NKX2-8O15522 239 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 SMPD2O60906 423 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 TIMP3P35625 211 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 MRPS11P82912 194 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 PSG7Q13046 419 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 TEX43Q6ZNM6 134 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-208ENST00000479530 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 RNF212BA8MTL3 300 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 K7EN84 100 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 NXPH2O95156 264 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 LINC00614P0C842 121 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 KITLGP21583 273 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 UBE2NP61088 152 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 ERVK11-1P61568 191 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 AESQ08117 197 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 TPRX1Q8N7U7 411 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 MIEN1Q9BRT3 115 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 QTRT1Q9BXR0 403 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 KCNIP2Q9NS61 270 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 PPIAL4AQ9Y536 164 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 IGHV3-43A0A0B4J1X8 118 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 TNFSF13O75888 250 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 IGHV3-43DP0DP04 118 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 CD46P15529 392 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 CD1BP29016 333 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 ARSJQ5FYB0 599 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
PDZRN3-208ENST00000479530 A0A1W2PPV4 95 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 C17orf112F2Z3M2 114 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 TGFBR3Q03167 851 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 GAGE1Q13065 139 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 KRTCAP3Q53RY4 240 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 Q6ZR03 302 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 PLPPR2Q96GM1 343 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 C20orf144Q9BQM9 153 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 MAP1BP46821 2468 aaKnown RBP11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 AQP7O14520 342 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 CRISP2P16562 243 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 SELENOTP62341 195 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 ZNF90Q03938 601 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 GALMQ96C23 342 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 CLDN14O95500 239 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 HBZP02008 142 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 RAC2P15153 192 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 TPPP2P59282 170 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 TBC1D28Q2M2D7 210 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 MRGPRDQ8TDS7 321 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 FER1L6-AS2Q96M78 137 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 HCFC1P51610 2035 aa11.05□□□□□ -0.64
PDZRN3-208ENST00000479530 WT1P19544 449 aaPredicted RBP11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 SSTR5P35346 364 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 CCL11P51671 97 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 ZNF146Q15072 292 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 FAM103A1Q9BTL3 118 aaKnown RBP11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 DMXL2Q8TDJ6 3036 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 M0QZK8 103 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 IER3P46695 156 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 TRIB1Q96RU8 372 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 FBXL7Q9UJT9 491 aa11.04□□□□□ -0.64
PDZRN3-208ENST00000479530 RP1L1Q8IWN7 2480 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 CADP27708 2225 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 SH2D1BO14796 132 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 RAB29O14966 203 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 SPINK4O60575 86 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 HAND1O96004 215 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 OR5I1Q13606 314 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 SPATA31B1PQ5VZV4 182 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 VWA1Q6PCB0 445 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 C11orf53Q8IXP5 236 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 SSMEM1Q8WWF3 244 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 MGST2Q99735 147 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms