RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 BET1LQ9NYM9 111 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 MMP24Q9Y5R2 645 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 DNAJC9-AS1A6NH13 148 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 CGB1A6NKQ9 187 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 UPK2O00526 184 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 SSNA1O43805 119 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 PITX3O75364 302 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 KBTBD11O94819 623 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 OR2F2O95006 317 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 SPDEFO95238 335 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 VDAC1P21796 283 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 LGALS7P47929 136 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 BCAP31P51572 246 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 AKR1C2P52895 323 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 OR2B8PP59922 312 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 NDPQ00604 133 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 MMDQ15546 238 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 AARDQ4LEZ3 155 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 C10orf55Q5SWW7 151 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 C11orf88Q6PI97 169 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 C5orf56Q8N8D9 126 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 TNFRSF19Q9NS68 423 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 MGAT4CQ9UBM8 478 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 METTL1Q9UBP6 276 aaKnown RBP10.41□□□□□ -0.74
CHD3-210ENST00000479080 SIGLEC9Q9Y336 463 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 TMED3Q9Y3Q3 217 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 MTORP42345 2549 aa10.41□□□□□ -0.74
CHD3-210ENST00000479080 E7EUB6 86 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 HRASP01112 189 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 ARHGDIBP52566 201 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 Q6ZS46 218 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 ZBTB8BQ8NAP8 495 aaPredicted RBP10.4□□□□□ -0.74
CHD3-210ENST00000479080 DMBX1Q8NFW5 382 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 OR4D5Q8NGN0 318 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 TSNAXQ99598 290 aaKnown RBP10.4□□□□□ -0.74
CHD3-210ENST00000479080 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
CHD3-210ENST00000479080 CHIAQ9BZP6 476 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 MED28Q9H204 178 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
CHD3-210ENST00000479080 CACNG5Q9UF02 275 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 VPREB3Q9UKI3 123 aa10.4□□□□□ -0.74
CHD3-210ENST00000479080 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 G3V3Q6 166 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 OR2A4O95047 310 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 ERVK-16P61578 105 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 SRSF4Q08170 494 aaKnown RBP10.39□□□□□ -0.75
CHD3-210ENST00000479080 CD300CQ08708 224 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 PRSS8Q16651 343 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 FOXRED2Q8IWF2 684 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 OR5R1Q8NH85 324 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 SSMEM1Q8WWF3 244 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHD3-210ENST00000479080 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 CLCC1Q96S66 551 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 HSPB9Q9BQS6 159 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
CHD3-210ENST00000479080 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 C15orf61A6NNL5 157 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 NXPH3O95157 252 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 CA2P00918 260 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 FAM157CP0CG43 387 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 HILS1P60008 231 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 SMCO1Q147U7 214 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 IAH1Q2TAA2 248 aaPredicted RBP10.38□□□□□ -0.75
CHD3-210ENST00000479080 CXorf66Q5JRM2 361 aaPredicted RBP10.38□□□□□ -0.75
CHD3-210ENST00000479080 H2BFWTQ7Z2G1 175 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 PPP1R27Q86WC6 154 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 TMEM86BQ8N661 226 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 RRNAD1Q96FB5 475 aaKnown RBP10.38□□□□□ -0.75
CHD3-210ENST00000479080 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
CHD3-210ENST00000479080 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 FOXA2Q9Y261 457 aaPredicted RBP10.38□□□□□ -0.75
CHD3-210ENST00000479080 POMT1Q9Y6A1 747 aa10.38□□□□□ -0.75
CHD3-210ENST00000479080 IGHV7-81A0A0B4J1V7 117 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 A0A1B0GU03 582 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 C13orf42A0A1B0GVH6 325 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
CHD3-210ENST00000479080 FAM25EA8MYX2 175 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 ST8SIA3O43173 380 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 FGF16O43320 207 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 GPR137BO60478 399 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
CHD3-210ENST00000479080 SLC25A6P12236 298 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 BLCAPP62952 87 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
CHD3-210ENST00000479080 Q5BKY6 102 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
CHD3-210ENST00000479080 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms