RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FUT9Q9Y231 359 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 A0A0U1RQK1 487 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 C11orf94C9JXX5 98 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 MMP23AO75900 390 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 IFNA10P01566 189 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 CENPVQ7Z7K6 275 aaPredicted RBP8.93□□□□□ -0.98
VPS52-217ENST00000478934 HSD17B10Q99714 261 aaKnown RBP8.93□□□□□ -0.98
VPS52-217ENST00000478934 IFI27L2Q9H2X8 130 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 WASF3Q9UPY6 502 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 TRBV24-1A0A075B6N3 115 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 CDC34P49427 236 aaPredicted RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 SSMEM1Q8WWF3 244 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 MRPL37Q9BZE1 423 aaKnown RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 ACTR3CQ9C0K3 210 aaPredicted RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 NDUFB4O95168 129 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 C1QTNF9P0C862 333 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 GPX4P36969 197 aaPredicted RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 GNG10P50151 68 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 GNB2P62879 340 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 HTD2P86397 168 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 C17orf58Q2M2W7 97 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 CT45A1Q5HYN5 189 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 ZADH2Q8N4Q0 377 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 CT45A3Q8NHU0 189 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 FAM122AQ96E09 287 aa8.92□□□□□ -0.98
VPS52-217ENST00000478934 PARD6GQ9BYG4 376 aaPredicted RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
VPS52-217ENST00000478934 XKRY2A2RUG3 117 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 MBD3L4A6NDZ8 208 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 MBD3L3A6NE82 208 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 MBD3L5A6NJ08 208 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 ZNF729A6NN14 1252 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 PPP5D1E7EU14 171 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 ADH4P08319 380 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 CD1BP29016 333 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 MIC13Q5XKP0 118 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 OR4A16Q8NH70 328 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 MBD3L2Q8NHZ7 208 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 CCL13Q99616 98 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 CALYQ9NYX4 217 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 TIMM9Q9Y5J7 89 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 ZNF318Q5VUA4 2279 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 APC2O95996 2303 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 RAI1Q7Z5J4 1906 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 MGST3O14880 152 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 AMBPP02760 352 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 HIST1H1BP16401 226 aaKnown RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 KLF3P57682 345 aaPredicted RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 GNB1P62873 340 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 DEFA6Q01524 100 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 FAM216BQ8N7L0 139 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 C1orf159Q96HA4 380 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 MS4A5Q9H3V2 200 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 ZMAT5Q9UDW3 170 aaKnown RBP8.91□□□□□ -0.98
VPS52-217ENST00000478934 SH3BGRL2Q9UJC5 107 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 LRBAP50851 2863 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 DSCAML1Q8TD84 2053 aa8.91□□□□□ -0.98
VPS52-217ENST00000478934 POLEQ07864 2286 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 A0A1B0GWJ7 208 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 RELBQ01201 579 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 TCF23Q7RTU1 214 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 PLXNB1O43157 2135 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
VPS52-217ENST00000478934 SAA2-SAA4A0A096LPE2 208 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 ZNF891A8MT65 544 aaPredicted RBP8.9□□□□□ -0.98
VPS52-217ENST00000478934 ZNF705GA8MUZ8 300 aaPredicted RBP8.9□□□□□ -0.98
VPS52-217ENST00000478934 HPRT1P00492 218 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 LHBP01229 141 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 SAA2P0DJI9 122 aaPredicted RBP8.9□□□□□ -0.98
VPS52-217ENST00000478934 ARL14EPLP0DKL9 152 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 SPATA31B1PQ5VZV4 182 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 NEIL1Q96FI4 390 aaPredicted RBP8.9□□□□□ -0.98
VPS52-217ENST00000478934 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 S1PR3Q99500 378 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 MGST2Q99735 147 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 CTDSP1Q9GZU7 261 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 SRD5A3Q9H8P0 318 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 GCM1Q9NP62 436 aa8.9□□□□□ -0.98
VPS52-217ENST00000478934 ZZEF1O43149 2961 aa8.9□□□□□ -0.99
VPS52-217ENST00000478934 A0A1W2PPV4 95 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 GFRA3O60609 400 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 YPEL1O60688 119 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 CEACAM4O75871 244 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 VDAC2P45880 294 aaPredicted RBP8.89□□□□□ -0.99
VPS52-217ENST00000478934 THBS3P49746 956 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 MOB3BQ86TA1 216 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 LYG1Q8N1E2 194 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 OR1P1Q8NH06 330 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 CIB3Q96Q77 187 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms