RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CLEC19AQ6UXS0 136 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 C19orf35Q6ZS72 473 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
VCL-205ENST00000478896 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 S4R3C0 116 aa9.98□□□□□ -0.81
VCL-205ENST00000478896 ZNF320A2RRD8 509 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 NPIPB5A8MRT5 1133 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 TEX22C9J3V5 150 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 ANKRD65E5RJM6 399 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 HLA-DQB1P01920 261 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 GNG2P59768 71 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 RPL30P62888 115 aaKnown RBP9.97□□□□□ -0.81
VCL-205ENST00000478896 CDNFQ49AH0 187 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 ZNF57Q68EA5 555 aaPredicted RBP9.97□□□□□ -0.81
VCL-205ENST00000478896 C22orf42Q6IC83 251 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 SSX9Q7RTT3 188 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 OR52B4Q8NGK2 314 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 NUDCD2Q8WVJ2 157 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 NDUFB11Q9NX14 153 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 BLOC1S6Q9UL45 172 aa9.97□□□□□ -0.81
VCL-205ENST00000478896 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 TRDV1A0A1B0GX56 115 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 TMEM235A6NFC5 223 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 SCAF4O95104 1147 aaKnown RBP9.96□□□□□ -0.82
VCL-205ENST00000478896 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 DEFA4P12838 97 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 CBLN1P23435 193 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 MAS1LP35410 378 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 FAM106AQ4KMX7 169 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 HACD4Q5VWC8 232 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 OR4A47Q6IF82 309 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 GPHB5Q86YW7 130 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 TMEM61Q8N0U2 210 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 TMEM167AQ8TBQ9 72 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 NRG4Q8WWG1 115 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 CCDC140Q96MF4 163 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 DCSTAMPQ9H295 470 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
VCL-205ENST00000478896 E7EUB6 86 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 NDUFB8O95169 186 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 HRASP01112 189 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 IGLV2-14P01704 120 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 REG1AP05451 166 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 IL6RP08887 468 aaPredicted RBP9.95□□□□□ -0.82
VCL-205ENST00000478896 ZNF735P0CB33 412 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 AREGP15514 252 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 HIST1H1BP16401 226 aaKnown RBP9.95□□□□□ -0.82
VCL-205ENST00000478896 PSMB6P28072 239 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 ANKRD55Q3KP44 614 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 CNIH2Q6PI25 160 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 BTNL8Q6UX41 500 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 PUSL1Q8N0Z8 303 aaKnown RBP9.95□□□□□ -0.82
VCL-205ENST00000478896 MFSD4AQ8N468 514 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 CNBD2Q96M20 576 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 GGTLC1Q9BX51 225 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 VCX3BQ9H321 246 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 HRASLSQ9HDD0 168 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 DNAH1Q9P2D7 4330 aa9.95□□□□□ -0.82
VCL-205ENST00000478896 LOC102724200A0A096LPH7 203 aaPredicted RBP9.94□□□□□ -0.82
VCL-205ENST00000478896 TMEM213A2RRL7 107 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 A8MWP6 167 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 TNFSF12O43508 249 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 SCGNO76038 276 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 ARPC4P59998 168 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
VCL-205ENST00000478896 ZNF66Q6ZN08 573 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 NR2C2APQ86WQ0 139 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 UXS1Q8NBZ7 420 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 CXorf58Q96LI9 332 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 FANCD2OSQ96PS1 177 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 GPHA2Q96T91 129 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 MLXQ9UH92 298 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 ANXA10Q9UJ72 324 aa9.94□□□□□ -0.82
VCL-205ENST00000478896 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 NOTOA8MTQ0 251 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 CRYGCP07315 174 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 MYOD1P15172 320 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 CTRB1P17538 263 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 HLA-GP17693 338 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 GALP22466 123 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 TIMM50Q3ZCQ8 353 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
VCL-205ENST00000478896 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 DAPK2Q9UIK4 370 aa9.93□□□□□ -0.82
VCL-205ENST00000478896 A0A1B0GW64 132 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 MFSD2BA6NFX1 497 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 CLEC3BP05452 202 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 GPR183P32249 361 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 HSPA13P48723 471 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 EIF4EBP1Q13541 118 aaPredicted RBP9.92□□□□□ -0.82
VCL-205ENST00000478896 IZUMO2Q6UXV1 221 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 SPAG16Q8N0X2 631 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms