RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RNF2Q99496 336 aa5.21□□□□□ -1.58
SPTLC1-205ENST00000477888 FAAP24Q9BTP7 215 aa5.21□□□□□ -1.58
SPTLC1-205ENST00000477888 RNF167Q9H6Y7 350 aa5.21□□□□□ -1.58
SPTLC1-205ENST00000477888 SEPSECSQ9HD40 501 aaKnown RBP5.21□□□□□ -1.58
SPTLC1-205ENST00000477888 MDFICQ9P1T7 246 aa5.21□□□□□ -1.58
SPTLC1-205ENST00000477888 IGLV11-55A0A075B6I3 123 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 K7EMT4 169 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 TMEM127O75204 238 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 ACTL6BO94805 426 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 CD2P06729 351 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 GSTT2P0CG29 244 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 GSTT2BP0CG30 244 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 IGFBP3P17936 291 aaPredicted RBP5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 NPY1RP25929 384 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 GPR183P32249 361 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 POLR2IP36954 125 aaKnown RBP5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 MORN3Q6PF18 240 aaPredicted RBP5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 CSNK1G2-AS1Q8NCQ2 148 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 GPR148Q8TDV2 347 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 C5orf30Q96GV9 206 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 CXorf58Q96LI9 332 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 FYTTD1Q96QD9 318 aaKnown RBP5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 C1orf43Q9BWL3 253 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 SLC2A9Q9NRM0 540 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 TMEM140Q9NV12 185 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 SDHAF2Q9NX18 166 aa5.2□□□□□ -1.58
SPTLC1-205ENST00000477888 TRBV6-6A0A0A6YYG2 114 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 IGKV1-6A0A0C4DH72 117 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 CRTAPO75718 401 aaPredicted RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 ZNF735P0CB33 412 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 SAA1P0DJI8 122 aaPredicted RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 RRASP10301 218 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 AREGP15514 252 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 HIST1H1BP16401 226 aaKnown RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 TFPI2P48307 235 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 GTF2A1P52655 376 aaPredicted RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 RPS27AP62979 156 aaKnown RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 MRPL28Q13084 256 aaKnown RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 CDK10Q15131 360 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 RTL8BQ17RB0 113 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 TMEM41BQ5BJD5 291 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 KDM4DQ6B0I6 523 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 TEPPQ6URK8 271 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 C6orf201Q7Z4U5 140 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 LHFPL3Q86UP9 236 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 MMD2Q8IY49 270 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 ARHGAP24Q8N264 748 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 OSR1Q8TAX0 266 aaPredicted RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 NICN1Q9BSH3 213 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 YTHDF1Q9BYJ9 559 aaKnown RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 RDH8Q9NYR8 311 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 SMPXQ9UHP9 88 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 TBC1D24Q9ULP9 559 aa5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 EXOGQ9Y2C4 368 aaKnown RBP5.19□□□□□ -1.58
SPTLC1-205ENST00000477888 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 TRAV8-7A0A075B6U6 113 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 IGHV3OR16-8A0A075B7F1 116 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 DPPA5A6NC42 116 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 NDUFA4O00483 81 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 CHEK1O14757 476 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 TGOLN2O43493 480 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 CREBL2O60519 120 aaPredicted RBP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 CRYZL1O95825 349 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 DHFRP00374 187 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 HOXB6P17509 224 aaKnown RBP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 BTF3P20290 206 aaKnown RBP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 C4BPBP20851 252 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 PTBP1P26599 531 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 VAMP2P63027 116 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 CBX3Q13185 183 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 LEMD1Q68G75 181 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 AWAT2Q6E213 333 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 ZNF66Q6ZN08 573 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 MOB1BQ7L9L4 216 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 TRPT1Q86TN4 253 aaKnown RBP5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 AQP12AQ8IXF9 295 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 SYT8Q8NBV8 401 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 ZNRF2Q8NHG8 242 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 GIMAP1Q8WWP7 306 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 NEDD4LQ96PU5 975 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 THTPAQ9BU02 230 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 RHPN1-AS1Q9BWJ2 59 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 TMEM14BQ9NUH8 114 aa5.18□□□□□ -1.58
SPTLC1-205ENST00000477888 IGKV3-7A0A075B6H7 116 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 LINC00473A8K010 186 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 C15orf62A8K5M9 175 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 ZNF207O43670 478 aaKnown RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 FKBP6O75344 327 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 DFFBO76075 338 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 CD1AP06126 327 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 SPP1P10451 314 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 GBX2P52951 348 aaPredicted RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 DEFB131AP59861 70 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 HLA-DRB3P79483 266 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 TPBGQ13641 420 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 XAF1Q6GPH4 301 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 STHQ8IWL8 128 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 CDH26Q8IXH8 852 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms