RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PHBP35232 272 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 REG1BP48304 166 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 GCLMP48507 274 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 EIF2B2P49770 351 aaKnown RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 RBP2P50120 134 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 DLX6P56179 175 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 RAB8AP61006 207 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 CKS1BP61024 79 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 MAXP61244 160 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 BTN3A2P78410 334 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 GTF2BQ00403 316 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PSG4Q00888 419 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 RUNX1Q01196 453 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 IFITM2Q01629 132 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PPP1R1AQ13522 171 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TSNQ15631 228 aaKnown RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 KCNJ8Q15842 424 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 HLA-DRB5Q30154 266 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 LIN52Q52LA3 116 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TNFAIP8L3Q5GJ75 292 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 HENMT1Q5T8I9 393 aaKnown RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 C1orf195Q5TG92 126 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FAM78BQ5VT40 261 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SAMD13Q5VXD3 122 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TMEM215Q68D42 235 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 GLYATQ6IB77 296 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 LAIR2Q6ISS4 152 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 XKRXQ6PP77 449 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 COMMD7Q86VX2 200 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SLC35F6Q8N357 371 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 LRRC25Q8N386 305 aaPredicted RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 TMEM86BQ8N661 226 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR9Q1Q8NGQ5 310 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR4K13Q8NH42 304 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR10A6Q8NH74 314 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 GNPDA2Q8TDQ7 276 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 Q8WTZ3 238 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 DNAJC9Q8WXX5 260 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ACOT12Q8WYK0 555 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ZHX1-C8orf76Q96EF9 292 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 RBP7Q96R05 134 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 HBEGFQ99075 208 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 APOL4Q9BPW4 351 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TCEAL7Q9BRU2 100 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 GINS3Q9BRX5 216 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 CCDC32Q9BV29 185 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TAPBPLQ9BX59 468 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR2D2Q9H210 308 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 MS4A6AQ9H2W1 248 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PRORYQ9H606 182 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 TPT1P8Q9HAU6 139 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 LRTM1Q9HBL6 345 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ENY2Q9NPA8 101 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 NIT2Q9NQR4 276 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 BIN3Q9NQY0 253 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FAM206AQ9NX38 181 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 RASL12Q9NYN1 266 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 DNAJC27Q9NZQ0 273 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 VPS29Q9UBQ0 182 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 JPT1Q9UK76 154 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 HSPB11Q9Y547 144 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 IBTKQ9P2D0 1353 aaPredicted RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 A2MP01023 1474 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ZNF106Q9H2Y7 1883 aaKnown RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 CITO14578 2027 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ERICH3Q5RHP9 1530 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FAM135BQ49AJ0 1406 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FGD6Q6ZV73 1430 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SETD5Q9C0A6 1442 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 MED13Q9UHV7 2174 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SCN10AQ9Y5Y9 1956 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 CEP170Q5SW79 1584 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 DNMBPQ6XZF7 1577 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 ARAP1Q96P48 1450 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TRBV24-1A0A075B6N3 115 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 A0A1B0GXF2 115 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 A0A1W2PRG6 482 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR4C46A6NHA9 309 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 FAM25AB3EWG3 89 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 FAM25CB3EWG5 89 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 FAM25GB3EWG6 89 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 G3V2T6 193 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SLC22A1O15245 554 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 EEF1E1O43324 174 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 TCF21O43680 179 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SYNGR1O43759 233 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 MFSD11O43934 449 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR2B3O76000 313 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 ATG12O94817 140 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OPN1SWP03999 348 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 REG1AP05451 166 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 CECR9P0C854 216 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 GPX2P18283 190 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SULT1A1P50225 295 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SULT1A2P50226 295 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TPI1P60174 286 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 RRAS2P62070 204 aaPredicted RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 RHOBP62745 196 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms