RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 C12orf45Q8N5I9 185 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 ADAD2Q8NCV1 583 aaKnown RBP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 OR8H1Q8NGG4 311 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 OR52B4Q8NGK2 314 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 MITD1Q8WV92 249 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SECTM1Q8WVN6 248 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 ASB13Q8WXK3 278 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 AGMATQ9BSE5 352 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF221Q9UK13 617 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 CRYM-AS1A6NIL9 109 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 ITGB1BP1O14713 200 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 NBR2O15453 112 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 PROP1O75360 226 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 B3GALNT1O75752 331 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
HDAC6-221ENST00000477561 OR8U9P0C7N5 309 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 IGLL1P15814 213 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 PI3P19957 117 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 RPL23AP62750 156 aaKnown RBP6.5□□□□□ -1.37
HDAC6-221ENST00000477561 SRPXP78539 464 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 LIN54Q6MZP7 749 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 C8orf86Q6ZUL3 223 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 KCTD9Q7L273 389 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 UXS1Q8NBZ7 420 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 ZBTB34Q8NCN2 500 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 OR8U1Q8NH10 309 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 CASTOR1Q8WTX7 329 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 TMEM230Q96A57 120 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 PARP11Q9NR21 331 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 SLC2A9Q9NRM0 540 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 MGAT4CQ9UBM8 478 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 WSB1Q9Y6I7 421 aa6.5□□□□□ -1.37
HDAC6-221ENST00000477561 G3V318 75 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 H0YJW9 148 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 M0R1X1 148 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 FCN1O00602 326 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 MPPED1O15442 326 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 VDAC1P21796 283 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 GNRHRP30968 328 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 PLGLAQ15195 96 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 C5orf64Q2M2E5 130 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 PHLDA2Q53GA4 152 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 FAM71F2Q6NXP2 309 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 TEX38Q6PEX7 206 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF645Q8N7E2 425 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF383Q8NA42 475 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 BVESQ8NE79 360 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 KLHL30-AS1Q8NEE0 82 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 NPBQ8NG41 125 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 OR11H7Q8NGC8 314 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 GALNT14Q96FL9 552 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 DUX3Q96PT4 197 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 CLCC1Q96S66 551 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 FBXL15Q9H469 300 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 CCL28Q9NRJ3 127 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 KIAA1456Q9P272 454 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 WASHC3Q9Y3C0 194 aa6.49□□□□□ -1.37
HDAC6-221ENST00000477561 PRKDCP78527 4128 aaKnown RBP6.49□□□□□ -1.37
HDAC6-221ENST00000477561 IGHV7-81A0A0B4J1V7 117 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 GOSR2O14653 212 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 RRHO14718 337 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 PLXNB1O43157 2135 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 PGLYRP1O75594 196 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 NDUFA3O95167 84 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 HLA-DRB1P01911 266 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 IGKV1-16P04430 117 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 GIPP09681 153 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 MC5RP33032 325 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 RPS16P62249 146 aaKnown RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 SUPT4H1P63272 117 aaKnown RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 CFHR3Q02985 330 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 CXorf66Q5JRM2 361 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ETV3LQ6ZN32 361 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 TBC1D26Q86UD7 250 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF695Q8IW36 515 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 MRPL41Q8IXM3 137 aaKnown RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 LGI3Q8N145 548 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 COMMD1Q8N668 190 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 WFDC9Q8NEX5 89 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 OR5AN1Q8NGI8 311 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 C5orf30Q96GV9 206 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ST6GAL2Q96JF0 529 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 GON7Q9BXV9 100 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF436Q9C0F3 470 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 OR2D2Q9H210 308 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 RANGRFQ9HD47 186 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-221ENST00000477561 ZFP57Q9NU63 452 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 SDHAF2Q9NX18 166 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms