RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ELANEP08246 267 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 CD40LGP29965 261 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 LPAR6P43657 344 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 CD83Q01151 205 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 SRSF4Q08170 494 aaKnown RBP10.32□□□□□ -0.76
TOP3A-205ENST00000477508 FOXE3Q13461 319 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 BAK1Q16611 211 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 C2orf68Q2NKX9 166 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 ZNF329Q86UD4 541 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 NDUFA11Q86Y39 141 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 DMBX1Q8NFW5 382 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 MRGPRFQ96AM1 343 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 R3HDM4Q96D70 268 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 SDHCQ99643 169 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-205ENST00000477508 TPSG1Q9NRR2 321 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 ZFP57Q9NU63 452 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 LINC00527Q9UJ94 153 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 TSSC4Q9Y5U2 329 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-205ENST00000477508 NUBP2Q9Y5Y2 271 aa10.32□□□□□ -0.76
TOP3A-205ENST00000477508 TET2Q6N021 2002 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 C3orf85A0A1B0GTC6 90 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 TCRBV4S1A1TA0A5B7 111 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 S1PR2O95136 353 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 CD28P10747 220 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 IL7P13232 177 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 PI3P19957 117 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 GNB1P62873 340 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 NDPQ00604 133 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 CFHR3Q02985 330 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 PJVKQ0ZLH3 352 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 ZNF585BQ52M93 769 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 CXorf66Q5JRM2 361 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 OR4A47Q6IF82 309 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 VKORC1L1Q8N0U8 176 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 C11orf44Q8N8P7 122 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 WDR12Q9GZL7 423 aaKnown RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 C5orf66Q9H5L9 145 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 ZNF430Q9H8G1 570 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-205ENST00000477508 KCNIP3Q9Y2W7 256 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 WSB1Q9Y6I7 421 aa10.31□□□□□ -0.76
TOP3A-205ENST00000477508 PIGBOS1A0A0B4J2F0 54 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 TEX13DA0A0J9YY54 714 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-205ENST00000477508 MARCH11A6NNE9 402 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 ARPC1BO15143 372 aaKnown RBP10.3□□□□□ -0.76
TOP3A-205ENST00000477508 KRASP01116 189 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 EGR2P11161 476 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-205ENST00000477508 SLC6A1P30531 599 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
TOP3A-205ENST00000477508 ZNF846Q147U1 533 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 TNXAQ16473 311 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 TMEM65Q6PI78 240 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 UNQ5815/PRO19632Q6UWF5 114 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 SSX9Q7RTT3 188 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 MINDY2Q8NBR6 621 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 OR5M8Q8NGP6 311 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 GRPEL2Q8TAA5 225 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 TSC22D3Q99576 134 aa10.3□□□□□ -0.76
TOP3A-205ENST00000477508 CRYM-AS1A6NIL9 109 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 G3V318 75 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 UPK2O00526 184 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 SNAPC5O75971 98 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 IL6RP08887 468 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-205ENST00000477508 HLA-GP17693 338 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 UCP1P25874 307 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 PSMB8P28062 276 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-205ENST00000477508 DHODHQ02127 395 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 RBMS2Q15434 407 aaKnown RBP10.29□□□□□ -0.76
TOP3A-205ENST00000477508 ECSCRQ19T08 205 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 MRGPRG-AS1Q2M3A8 158 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 LFNGQ8NES3 379 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
TOP3A-205ENST00000477508 PHB2Q99623 299 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 NAA60Q9H7X0 242 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 TMEM140Q9NV12 185 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 FBXO7Q9Y3I1 522 aa10.29□□□□□ -0.76
TOP3A-205ENST00000477508 A0A1W2PN81 502 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 MSGN1A6NI15 193 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 H3BUA1 57 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 ANXA3P12429 323 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 CHRNA7P36544 502 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
TOP3A-205ENST00000477508 TRIM16LQ309B1 348 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 KHDC1LQ5JSQ8 128 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 PRR31Q5SQ13 230 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 C10orf99Q6UWK7 81 aa10.28□□□□□ -0.76
TOP3A-205ENST00000477508 H2BFWTQ7Z2G1 175 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms