RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ANKRD55Q3KP44 614 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 KLHDC1Q8N7A1 406 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 TCTEX1D1Q8N7M0 179 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 OR4C13Q8NGP0 309 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 OR5R1Q8NH85 324 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 LHFPL5Q8TAF8 219 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 CD300LFQ8TDQ1 290 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 FLYWCH2Q96CP2 140 aaKnown RBP9.16□□□□□ -0.94
LSM2-212ENST00000477182 R3HDM4Q96D70 268 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 RITA1Q96K30 269 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 TMEM222Q9H0R3 208 aa9.16□□□□□ -0.94
LSM2-212ENST00000477182 FAM212BQ9NTI7 297 aaPredicted RBP9.16□□□□□ -0.94
LSM2-212ENST00000477182 PRAF2O60831 178 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 HPRT1P00492 218 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 RPA2P15927 270 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 CNTFRP26992 372 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 TATDN3Q17R31 274 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 TMEM177Q53S58 311 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 LIN54Q6MZP7 749 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 LIAT1Q6ZQX7 453 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 TMEM219Q86XT9 240 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 NDUFA11Q86Y39 141 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 Q8N6K4 173 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 OSR1Q8TAX0 266 aaPredicted RBP9.15□□□□□ -0.94
LSM2-212ENST00000477182 ZNF431Q8TF32 576 aaPredicted RBP9.15□□□□□ -0.94
LSM2-212ENST00000477182 HARBI1Q96MB7 349 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 GPN1Q9HCN4 374 aaPredicted RBP9.15□□□□□ -0.94
LSM2-212ENST00000477182 COMMD9Q9P000 198 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 TCF19Q9Y242 345 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 U3KQK5 164 aa9.15□□□□□ -0.94
LSM2-212ENST00000477182 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
LSM2-212ENST00000477182 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 A6NDX4 124 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 SRRM4A7MD48 611 aaKnown RBP9.14□□□□□ -0.95
LSM2-212ENST00000477182 DUS4LO95620 317 aaKnown RBP9.14□□□□□ -0.95
LSM2-212ENST00000477182 CDS2O95674 445 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 IGLL1P15814 213 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 G6PCP35575 357 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 SRPXP78539 464 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 MMDQ15546 238 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 SSX9Q7RTT3 188 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 ZNF695Q8IW36 515 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 SELENOHQ8IZQ5 122 aaKnown RBP9.14□□□□□ -0.95
LSM2-212ENST00000477182 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 LGI3Q8N145 548 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 WFDC9Q8NEX5 89 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 TMEM56Q96MV1 263 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
LSM2-212ENST00000477182 ALG5Q9Y673 324 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 TMEM56-RWDD3S4R434 201 aa9.14□□□□□ -0.95
LSM2-212ENST00000477182 TNCP24821 2201 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 C7orf66A4D0T2 115 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 SNRPGP15A8MWD9 76 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 SLC25A17O43808 307 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 CREBL2O60519 120 aaPredicted RBP9.13□□□□□ -0.95
LSM2-212ENST00000477182 FBXO24O75426 580 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 HRASP01112 189 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 KRASP01116 189 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 IGLV2-23P01705 113 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 NQO2P16083 231 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 LGALS7P47929 136 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 F2RL1P55085 397 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 ERVK-16P61578 105 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 PSG5Q15238 335 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 C12orf45Q8N5I9 185 aaPredicted RBP9.13□□□□□ -0.95
LSM2-212ENST00000477182 UXS1Q8NBZ7 420 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 COQ8AQ8NI60 647 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 MITD1Q8WV92 249 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 RBPMSQ93062 196 aaKnown RBP9.13□□□□□ -0.95
LSM2-212ENST00000477182 RHOVQ96L33 236 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 PHB2Q99623 299 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 RNF5Q99942 180 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 SLC25A33Q9BSK2 321 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 PITPNC1Q9UKF7 332 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 SIGLEC9Q9Y336 463 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
LSM2-212ENST00000477182 A0A0B4J2A0 478 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 NCBP2LA6PVI3 153 aaKnown RBP9.12□□□□□ -0.95
LSM2-212ENST00000477182 NBR2O15453 112 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 CHST1O43916 411 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 OR2F2O95006 317 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 IGKV1-5P01602 117 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 SAA1P0DJI8 122 aaPredicted RBP9.12□□□□□ -0.95
LSM2-212ENST00000477182 AKR1C2P52895 323 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 POU2AF1Q16633 256 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 IZUMO4Q1ZYL8 232 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 VMA21Q3ZAQ7 101 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 OR4A47Q6IF82 309 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 LYZL2Q7Z4W2 148 aa9.12□□□□□ -0.95
LSM2-212ENST00000477182 SLC35G3Q8N808 338 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms