RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 FYTTD1Q96QD9 318 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 KLK9Q9UKQ9 250 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 DNAH2Q9P225 4427 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 TRBV7-1A0A0A6YYK4 115 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 IGHV3-35A0A0C4DH35 117 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 MFSD2BA6NFX1 497 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 FCGR3BO75015 233 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 FCGR3AP08637 254 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 OR5B3Q8NH48 314 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 RARRES2Q99969 163 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 C11orf68Q9H3H3 251 aaKnown RBP12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 SMPD3Q9NY59 655 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 MUC4Q99102 2169 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
APOBEC3F-203ENST00000476513 MYL12BO14950 172 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 DHFRP00374 187 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 MYOD1P15172 320 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 HSD17B12Q53GQ0 312 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 MS4A15Q8N5U1 240 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 MAFIPQ8WZ33 124 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 GFI1Q99684 422 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 GINS4Q9BRT9 223 aa12.08□□□□□ -0.48
APOBEC3F-203ENST00000476513 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 IGLL5B9A064 214 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 SLC17A2O00624 439 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 XRCC3O43542 346 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 KBTBD11O94819 623 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 CDK1P06493 297 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 GPR183P32249 361 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 NANOGP1Q8N7R0 232 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 TMEM167AQ8TBQ9 72 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 OR2A7Q96R45 310 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 KRTAP4-5Q9BYR2 181 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 CSTL1Q9H114 145 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 PLGRKTQ9HBL7 147 aa12.07□□□□□ -0.48
APOBEC3F-203ENST00000476513 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 REG1AP05451 166 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 RPL30P62888 115 aaKnown RBP12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 ARFRP1Q13795 201 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 LAMTOR1Q6IAA8 161 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 PLET1Q6UQ28 207 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 KCTD9Q7L273 389 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 PUSL1Q8N0Z8 303 aaKnown RBP12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 ZNF502Q8TBZ5 544 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 ZNF436Q9C0F3 470 aaPredicted RBP12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 PRELID3BQ9Y3B1 194 aa12.06□□□□□ -0.48
APOBEC3F-203ENST00000476513 J3QRK9 145 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 DEFB4AO15263 64 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 UCHL1P09936 223 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 DEFA4P12838 97 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 MAS1LP35410 378 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 PSMD7P51665 324 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 MFAP2P55001 183 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 CLDN12P56749 244 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 RAB11BQ15907 218 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 PQLC1Q8N2U9 271 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 C6orf62Q9GZU0 229 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 PSORS1C1Q9UIG5 152 aa12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 MRPS7Q9Y2R9 242 aaKnown RBP12.05□□□□□ -0.48
APOBEC3F-203ENST00000476513 RPA2P15927 270 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 PLA2G7Q13093 441 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 ZNF124Q15973 351 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 LAIR2Q6ISS4 152 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 AHSA2Q719I0 299 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 CYGBQ8WWM9 190 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 RAB3CQ96E17 227 aa12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
APOBEC3F-203ENST00000476513 DNAH17Q9UFH2 4485 aa12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 DENRO43583 198 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 FAM3DQ96BQ1 224 aa12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 RBMX2Q9Y388 322 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 AK6Q9Y3D8 172 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-203ENST00000476513 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms