RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SRD5A2P31213 254 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 TPPP2P59282 170 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 BAXQ07812 192 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 C5orf64Q2M2E5 130 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 WIPI1Q5MNZ9 446 aaPredicted RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 PKIBQ9C010 78 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 CACNG5Q9UF02 275 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PILRBQ9UKJ0 227 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 ZFHX2Q9C0A1 2572 aaPredicted RBP7.02□□□□□ -1.28
VAPB-205ENST00000476395 TRAV26-1A0A087WT03 109 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 IGKV1-5P01602 117 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FGF12P61328 243 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 GNB1P62873 340 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 SMIM21Q3B7S5 101 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 MRPL21Q7Z2W9 205 aaKnown RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 OR2Y1Q8NGV0 311 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 HARBI1Q96MB7 349 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 DUXBA0A1W2PPF3 345 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 TNFRSF6BO95407 300 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 CRISP2P16562 243 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 GPM6AP51674 278 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 UBE2NP61088 152 aaKnown RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 MALLQ13021 153 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 IL11RAQ14626 422 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 ZNF585BQ52M93 769 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 WDR5BQ86VZ2 330 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 RPS19BP1Q86WX3 136 aaKnown RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 CCDC71LQ8N9Z2 235 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 OR5D13Q8NGL4 314 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 BOD1L1Q8NFC6 3051 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A10PA6NDY2 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A18PA6NE21 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A16PA6NEW6 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A20PA6NIJ5 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A8PA6NJQ4 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A7PA6NKC0 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A22PA8MWA6 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A12PA8MX19 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A5PA8MXJ8 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A23PA8MXZ1 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A15PP0C7V4 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A13PP0C7W8 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A14PP0C7W9 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM90A24PP0C7X0 464 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 VDAC1P21796 283 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 PSMB3P49720 205 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 RELBQ01201 579 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 TFF3Q07654 80 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 LPAL2Q16609 132 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 TMEM177Q53S58 311 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 SPINK9Q5DT21 86 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 FAM53AQ6NSI3 398 aaPredicted RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 WDR86Q86TI4 376 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 MOGAT3Q86VF5 341 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 ABHD14BQ96IU4 210 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 LRFN3Q9BTN0 628 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 WDR61Q9GZS3 305 aaKnown RBP7.02□□□□□ -1.29
VAPB-205ENST00000476395 ZNF391Q9UJN7 358 aa7.02□□□□□ -1.29
VAPB-205ENST00000476395 IGKV3D-15A0A087WSY6 115 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 IGHV2OR16-5A0A0B4J2B6 119 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 H0Y980 276 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 S100GP29377 79 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 SRP14P37108 136 aaKnown RBP7.01□□□□□ -1.29
VAPB-205ENST00000476395 IER3P46695 156 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 BRWD1-AS2P59051 145 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 PRDX4Q13162 271 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 VAMP3Q15836 100 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 KCNIP4Q6PIL6 250 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 AAED1Q7RTV5 226 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 C1orf174Q8IYL3 243 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
VAPB-205ENST00000476395 GNB4Q9HAV0 340 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 PSENENQ9NZ42 101 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 OR1A1Q9P1Q5 309 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 TRBV6-6A0A0A6YYG2 114 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 PATE3B3GLJ2 98 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 F6UZH7 168 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 HS3ST1O14792 307 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 ATP5IP56385 69 aaPredicted RBP7.01□□□□□ -1.29
VAPB-205ENST00000476395 LRRC75BQ2VPJ9 315 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 SAMD13Q5VXD3 122 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 UHRF2Q96PU4 802 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 DUSP23Q9BVJ7 150 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 RAB1BQ9H0U4 201 aa7.01□□□□□ -1.29
VAPB-205ENST00000476395 PTPRZ1P23471 2315 aaPredicted RBP7.01□□□□□ -1.29
VAPB-205ENST00000476395 IGHV2-70DA0A0C4DH43 119 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TOMM40O96008 361 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TSPOP30536 169 aa7□□□□□ -1.29
VAPB-205ENST00000476395 OTX2P32243 289 aa7□□□□□ -1.29
VAPB-205ENST00000476395 AMTP48728 403 aa7□□□□□ -1.29
VAPB-205ENST00000476395 HOXA4Q00056 320 aaPredicted RBP7□□□□□ -1.29
VAPB-205ENST00000476395 EIF4EBP1Q13541 118 aaPredicted RBP7□□□□□ -1.29
VAPB-205ENST00000476395 CEACAM21Q3KPI0 293 aa7□□□□□ -1.29
VAPB-205ENST00000476395 PMS2CLQ68D20 193 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms