RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SPIN2AQ99865 258 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 SPIN2BQ9BPZ2 258 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 AIFM2Q9BRQ8 373 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 ADAM30Q9UKF2 790 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 IGHV4OR15-8A0A075B7B6 117 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 A0A087WW49 117 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 SULT1C2O00338 296 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL1A1-205ENST00000476387 NOL3O60936 208 aaKnown RBP12.5□□□□□ -0.41
COL1A1-205ENST00000476387 TSPAN5P62079 268 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
COL1A1-205ENST00000476387 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-205ENST00000476387 KMT2CQ8NEZ4 4911 aaKnown RBP12.49□□□□□ -0.41
COL1A1-205ENST00000476387 OVOL1O14753 267 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 HSPB1P04792 205 aaKnown RBP12.49□□□□□ -0.41
COL1A1-205ENST00000476387 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 SLURP1P55000 103 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 BRWD1-AS2P59051 145 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 SSX9Q7RTT3 188 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
COL1A1-205ENST00000476387 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-205ENST00000476387 FXYD6Q9H0Q3 95 aa12.49□□□□□ -0.41
COL1A1-205ENST00000476387 RGS5O15539 181 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 BRI3O95415 125 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 GNRHRP30968 328 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 MAS1LP35410 378 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 RPL27AP46776 148 aaKnown RBP12.48□□□□□ -0.41
COL1A1-205ENST00000476387 TAS2R31P59538 309 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
COL1A1-205ENST00000476387 SLC25A42Q86VD7 318 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
COL1A1-205ENST00000476387 C15orf40Q8WUR7 153 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 BCL7BQ9BQE9 202 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
COL1A1-205ENST00000476387 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 HPRT1P00492 218 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 RLN1P04808 185 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 NQO2P16083 231 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 S100GP29377 79 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
COL1A1-205ENST00000476387 DEFA5Q01523 94 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 SPCS2Q15005 226 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 OR4A47Q6IF82 309 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 LYSMD2Q8IV50 215 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 OR4A5Q8NH83 315 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 USMG5Q96IX5 58 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
COL1A1-205ENST00000476387 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 COMMD9Q9P000 198 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 U3KQK5 164 aa12.47□□□□□ -0.41
COL1A1-205ENST00000476387 GPR31O00270 319 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 TPPPO94811 219 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 ZP3P21754 424 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.41
COL1A1-205ENST00000476387 TMBIM6P55061 237 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 ERVK-16P61578 105 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-205ENST00000476387 PLEKHA2Q9HB19 425 aa12.46□□□□□ -0.41
COL1A1-205ENST00000476387 RANGRFQ9HD47 186 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-205ENST00000476387 ANKRD34BA5PLL1 514 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 FAM223BA6NKX1 122 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 SAP30O75446 220 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 S1PR2O95136 353 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 LY86O95711 162 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 IFNA6P05013 189 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 HLA-GP17693 338 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 F2RP25116 425 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 RHOGP84095 191 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 POU2AF1Q16633 256 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 FAM223AQ8IWN6 122 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 LAX1Q8IWV1 398 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 CCDC59Q9P031 241 aaKnown RBP12.45□□□□□ -0.42
COL1A1-205ENST00000476387 ZNF257Q9Y2Q1 563 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
COL1A1-205ENST00000476387 HMX3A6NHT5 357 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 M0QYG6 137 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 PGLYRP1O75594 196 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-205ENST00000476387 TBPP20226 339 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 PHLDA2Q53GA4 152 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 RNASE10Q5GAN6 216 aaKnown RBP12.44□□□□□ -0.42
COL1A1-205ENST00000476387 ACSM6Q6P461 480 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 OR52I2Q8NH67 350 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 FCAMRQ8WWV6 532 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
COL1A1-205ENST00000476387 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 TEX22C9J3V5 150 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 DHFRP00374 187 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms