RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	TOLLIP	Q9H0E2	274 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	NSRP1	Q9H0G5	558 aa	Known RBP	2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	POLR2J3	Q9H1A7	115 aa	Known RBP	2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	HES4	Q9HCC6	221 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	RPRD1B	Q9NQG5	326 aa	Known RBP	2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	RASL12	Q9NYN1	266 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	SLC22A13	Q9Y226	551 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	SIGLEC7	Q9Y286	467 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	PIGL	Q9Y2B2	252 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	LINC00312	Q9Y6C7	94 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912	TNC	P24821	2201 aa		2.99	□□□□□ -1.93
PRKD3-208	ENST00000475912		A0A087WUU8	490 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	IGHV3-72	A0A0B4J1Y9	119 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	hADV38S2	A0JD32	116 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	NCBP2L	A6PVI3	153 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	OOSP1	A8MZH6	123 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	NOS1AP	O75052	506 aa	Predicted RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	NDUFB2	O95178	105 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	IGHV3-48	P01763	117 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	CD7	P09564	240 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RBMY1A1	P0DJD3	496 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	HIST1H1C	P16403	213 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	PPIB	P23284	216 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	CEACAM3	P40198	252 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	YAP1	P46937	504 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	GZMM	P51124	257 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RAB9A	P51151	201 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	ZNF121	P58317	390 aa	Predicted RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	SEC61G	P60059	68 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	GNG3	P63215	75 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	ZNF45	Q02386	682 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	TNFRSF9	Q07011	255 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	EBI3	Q14213	229 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	CEACAM21	Q3KPI0	293 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	HEPN1	Q6WQI6	88 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	OFCC1	Q8IZS5	231 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	PGAM4	Q8N0Y7	254 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	FTMT	Q8N4E7	242 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	MREG	Q8N565	214 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR4K13	Q8NH42	304 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	CASTOR1	Q8WTX7	329 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RGP1	Q92546	391 aa	Predicted RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RPE	Q96AT9	228 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	C10orf35	Q96D05	121 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	PRRC1	Q96M27	445 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR52B2	Q96RD2	323 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RNF2	Q99496	336 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	ABCB9	Q9NP78	766 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	DNAJC27	Q9NZQ0	273 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	GLS2	Q9UI32	602 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	COPS3	Q9UNS2	423 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	RRP15	Q9Y3B9	282 aa	Known RBP	2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	WSB1	Q9Y6I7	421 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	COMMD3-BMI1	R4GMX3	469 aa		2.98	□□□□□ -1.93
PRKD3-208	ENST00000475912	VPS13B	Q7Z7G8	4022 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	DHRS12	A0PJE2	317 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	FAM183A	A6NL82	134 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	EVPLL	A8MZ36	301 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	ZNF878	C9JN71	531 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912		H0Y980	276 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	TOR1A	O14656	332 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	UBD	O15205	165 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	SOX15	O60248	233 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	IGHV3-11	P01762	117 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	IGHV3-7	P01780	117 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	LGALS1	P09382	135 aa	Known RBP	2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	CFL1	P23528	166 aa	Known RBP	2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	PYCR1	P32322	319 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	HAAO	P46952	286 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	ARL6IP1	Q15041	203 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	GRK1	Q15835	563 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR2G6	Q5TZ20	316 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	UQCC3	Q6UW78	93 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	MBOAT2	Q6ZWT7	520 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	FAM220A	Q7Z4H9	259 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	TMEM179B	Q7Z7N9	219 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	TRAPPC6B	Q86SZ2	158 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	TMEM252	Q8N6L7	170 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	BBS1	Q8NFJ9	593 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR52L1	Q8NGH7	329 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR51L1	Q8NGJ5	315 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	OR1L4	Q8NGR5	311 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	RASSF5	Q8WWW0	418 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	LEAP2	Q969E1	77 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	CREB3L1	Q96BA8	519 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	ERMAP	Q96PL5	475 aa	Predicted RBP	2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	AMELY	Q99218	206 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	RBKS	Q9H477	322 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	RABL2B	Q9UNT1	228 aa		2.97	□□□□□ -1.93
PRKD3-208	ENST00000475912	IGKV1D-8	A0A087WSZ0	117 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	IGHV1-3	A0A0C4DH29	117 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	OR5B21	A6NL26	309 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	TRPC5OS	A6NMA1	111 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	C16orf90	A8MZG2	172 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	OR11H12	B2RN74	326 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	ZNF736	B4DX44	427 aa	Predicted RBP	2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912		J3QT63	122 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912		M0R2N4	97 aa		2.96	□□□□□ -1.94
PRKD3-208	ENST00000475912	ZNF593	O00488	134 aa	Predicted RBP	2.96	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms