RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 TESCQ96BS2 214 aa0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 GNPNAT1Q96EK6 184 aaPredicted RBP0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 DHRS9Q9BPW9 319 aa0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 C7orf50Q9BRJ6 194 aaKnown RBP0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 CXorf21Q9HAI6 301 aa0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 HES4Q9HCC6 221 aa0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 EURLQ9NYK6 297 aa0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
SEC23IP-206ENST00000475542 FREM1Q5H8C1 2179 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 HPGDSO60760 199 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 MRPS14O60783 128 aaKnown RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 APOMO95445 188 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 HIST1H1CP16403 213 aaKnown RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 HAAOP46952 286 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 CXCR4P61073 352 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 FAM19A5Q7Z5A7 132 aaPredicted RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 PACRGQ96M98 296 aaPredicted RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 UPF3BQ9BZI7 483 aaKnown RBP0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 SPACA1Q9HBV2 294 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 PRELID1Q9Y255 219 aa0.67□□□□□ -2.3
SEC23IP-206ENST00000475542 PCDH15Q96QU1 1955 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 MYOFQ9NZM1 2061 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 IGKV2D-26A0A0A0MRZ7 120 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 TRAPPC13A5PLN9 417 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 MEIS3P1A6NDR6 274 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 FABP12A6NFH5 140 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 BIRC5O15392 142 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 NSA2O95478 260 aaKnown RBP0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 REG1AP05451 166 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 RAB13P51153 203 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 PPP1R1AQ13522 171 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 FAM27BQ5VT28 67 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 SBSNQ6UWP8 590 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 HIST2H3AQ71DI3 136 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 Q8N2B8 174 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 UMODL1-AS1Q8N2C9 162 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 RPP25LQ8N5L8 163 aaKnown RBP0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 TBC1D19Q8N5T2 526 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 ZNF676Q8N7Q3 588 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 HAVCR2Q8TDQ0 301 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 CHST6Q9GZX3 395 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 WDR54Q9H977 334 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 MED9Q9NWA0 146 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 ANAPC10Q9UM13 185 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 COQ4Q9Y3A0 265 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 BAZ2BQ9UIF8 2168 aaKnown RBP0.66□□□□□ -2.3
SEC23IP-206ENST00000475542 SYNRGQ9UMZ2 1314 aa0.65□□□□□ -2.3
SEC23IP-206ENST00000475542 OR51F1A6NGY5 319 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 FAM25EA8MYX2 175 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 TRAPPC2LH3BP13 241 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 I3L521 148 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 PLA2G10O15496 165 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 OCMP0CE72 109 aaPredicted RBP0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 UBBP0CG47 229 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 CCL5P13501 91 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 REG1BP48304 166 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 CDC34P49427 236 aaPredicted RBP0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 UBE2G2P60604 165 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 ACSM3Q53FZ2 586 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 SSX8Q7RTT4 187 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 SLC51BQ86UW2 128 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 OR7G1Q8NGA0 311 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 SMIM19Q96E16 107 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 ERMAPQ96PL5 475 aaPredicted RBP0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 GPR84Q9NQS5 396 aa0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 SPANXB1Q9NS25 103 aaPredicted RBP0.65□□□□□ -2.31
SEC23IP-206ENST00000475542 PTPRSQ13332 1948 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 IBA57-AS1B1ANH7 110 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 F5H768 121 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 LEPROTO15243 131 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 CALUO43852 315 aaPredicted RBP0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 HLA-DMBP28068 263 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 PSMB6P28072 239 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 DDTP30046 118 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 S100A7P31151 101 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 CSN1S1P47710 185 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 SKP1P63208 163 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 C5orf46Q6UWT4 87 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 COMMD7Q86VX2 200 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 C9orf163Q8N9P6 203 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 OR8B3Q8NGG8 313 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 SGMS2Q8NHU3 365 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 KCTD7Q96MP8 289 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 REG4Q9BYZ8 158 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 FKBP14Q9NWM8 211 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 DKKL1Q9UK85 242 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 C15orf41Q9Y2V0 281 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 C22orf24Q9Y442 160 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 PXMP4Q9Y6I8 212 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 KIF15Q9NS87 1388 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
SEC23IP-206ENST00000475542 KIF24Q5T7B8 1368 aa0.63□□□□□ -2.31
SEC23IP-206ENST00000475542 A0A1B0GW54 56 aa0.63□□□□□ -2.31
SEC23IP-206ENST00000475542 GGT3PA6NGU5 568 aa0.63□□□□□ -2.31
SEC23IP-206ENST00000475542 TMEM212A6NML5 194 aa0.63□□□□□ -2.31
SEC23IP-206ENST00000475542 COCHO43405 550 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms