RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 KPTNQ9Y664 436 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 RBFOX3A6NFN3 312 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 H7C2Y5 167 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 FSTL3O95633 263 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 APOA2P02652 100 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 FGF7P21781 194 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 ELLP55199 621 aaPredicted RBP12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 C8orf31Q8N9H6 132 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 TMEM14BQ9NUH8 114 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 REG1BP48304 166 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 HSPE1P61604 102 aaKnown RBP12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 TMEM186Q96B77 213 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 RARRES2Q99969 163 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 ENY2Q9NPA8 101 aa12.54□□□□□ -0.4
RPUSD3-215ENST00000475470 VWC2Q2TAL6 325 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 SAV1Q9H4B6 383 aaPredicted RBP12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 PRNDQ9UKY0 176 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 NPBWR1P48145 328 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 HAGHQ16775 308 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 ETV3LQ6ZN32 361 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 OR51B2Q9Y5P1 312 aa12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
RPUSD3-215ENST00000475470 A0A087X0M5 115 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 TRAV1-1A0A0B4J248 108 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 A0A1B0GX30 115 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 SRRM4A7MD48 611 aaKnown RBP12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 RRHO14718 337 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 C4orf17Q53FE4 359 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 FAM71F2Q6NXP2 309 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 ZNF841Q6ZN19 808 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 ZNF709Q8N972 641 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 OSR1Q8TAX0 266 aaPredicted RBP12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 HINT2Q9BX68 163 aa12.52□□□□□ -0.4
RPUSD3-215ENST00000475470 H0YJW9 148 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 UPK2O00526 184 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 LY6HO94772 140 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 SOD3P08294 240 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 GNLYP22749 145 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 CD1BP29016 333 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 RAB11AP62491 216 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 OR5AN1Q8NGI8 311 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 RCC1LQ96I51 464 aaKnown RBP12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 ABCA4P78363 2273 aa12.52□□□□□ -0.41
RPUSD3-215ENST00000475470 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 TMEM8BA6NDV4 472 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 IL6RP08887 468 aaPredicted RBP12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 HARBI1Q96MB7 349 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 C17orf112F2Z3M2 114 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 IFNA4P05014 189 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 MYOD1P15172 320 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 C11orf71Q6IPW1 123 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 OR8B3Q8NGG8 313 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 NEU4Q8WWR8 484 aaPredicted RBP12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 RAB1CQ92928 201 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 LHX4Q969G2 390 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 TIMD4Q96H15 378 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 OR8B2Q96RD0 313 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 MIOXQ9UGB7 285 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 ZNF257Q9Y2Q1 563 aa12.51□□□□□ -0.41
RPUSD3-215ENST00000475470 SMCO3A2RU48 225 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 KBTBD11O94819 623 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 MBP02144 154 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 SAA1P0DJI8 122 aaPredicted RBP12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 TGIF2LXQ8IUE1 241 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 CLDND2Q8NHS1 167 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
RPUSD3-215ENST00000475470 OPN1MWP04001 364 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms