RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 S100A11P31949 105 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 CEACAM3P40198 252 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 AKR1C2P52895 323 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 DLX1P56177 255 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 POLR2GP62487 172 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATG4A-207ENST00000474825 TNFRSF9Q07011 255 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 EBI3Q14213 229 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 RTL8BQ17RB0 113 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 IZUMO4Q1ZYL8 232 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 LRRC37A5PQ49AS3 106 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 OR2B11Q5JQS5 317 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 SPNS3Q6ZMD2 512 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 TMUB2Q71RG4 321 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 H2BFWTQ7Z2G1 175 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 OR4C13Q8NGP0 309 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 OR4A5Q8NH83 315 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 GRPEL2Q8TAA5 225 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 CFHR4Q92496 578 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 MALSU1Q96EH3 234 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 SMIM8Q96KF7 97 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 RHOVQ96L33 236 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 RAB40CQ96S21 281 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 MFFQ9GZY8 342 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 SLA2Q9H6Q3 261 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 SIRT7Q9NRC8 400 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 PLSCR3Q9NRY6 295 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM14BQ9NUH8 114 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 FOXA2Q9Y261 457 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-207ENST00000474825 ZNF257Q9Y2Q1 563 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 WSB1Q9Y6I7 421 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 CSMD1Q96PZ7 3565 aa5.33□□□□□ -1.56
ATG4A-207ENST00000474825 ZNF469Q96JG9 3925 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-207ENST00000474825 ABCA12Q86UK0 2595 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 CENPVL3A0A0U1RRI6 287 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 C15orf61A6NNL5 157 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 J3QLI3 93 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 L7N2F9 121 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 UPK2O00526 184 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 ARPC5O15511 151 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 SYNGR2O43760 224 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 CHST1O43916 411 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 TSC22D2O75157 780 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 ARG1P05089 322 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 OR9G9P0C7N8 305 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 EPHA1P21709 976 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 COX7A1P24310 79 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 REG1BP48304 166 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 RIPPLY3P57055 190 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 UBE2KP61086 200 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 KLRD1Q13241 179 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 OPCMLQ14982 345 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 MRGPRG-AS1Q2M3A8 158 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 OR4A47Q6IF82 309 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 CCDC144NLQ6NUI1 221 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 STPG2Q8N412 459 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 Q8N6K4 173 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 LINC01356Q8N9X3 169 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 TEX45Q8NA69 505 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 INO80EQ8NBZ0 244 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM167AQ8TBQ9 72 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 DCUN1D4Q92564 292 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 RPEQ96AT9 228 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
ATG4A-207ENST00000474825 FOXC2Q99958 501 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 REG4Q9BYZ8 158 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 LPAR2Q9HBW0 351 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 CYTL1Q9NRR1 136 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 LYRM2Q9NU23 88 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM140Q9NV12 185 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 POLQO75417 2590 aa5.32□□□□□ -1.56
ATG4A-207ENST00000474825 TRAV3A0A0B4J244 114 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 TAAR5O14804 337 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 BCL2L11O43521 198 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 GPR137BO60478 399 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 MED6O75586 246 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 KBTBD11O94819 623 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 NDUFA3O95167 84 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 VENTXO95231 258 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 SPDEFO95238 335 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 FSHBP01225 129 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 SAA1P0DJI8 122 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 PVALBP20472 110 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 RPL12P30050 165 aaKnown RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 VDAC2P45880 294 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 DYNLT3P51808 116 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 BPIFB3P59826 476 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 S100A10P60903 97 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 SPCS3P61009 180 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 ERVK-16P61578 105 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 BAXQ07812 192 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 Q5PR19 223 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM14EPQ6UXP3 125 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 LHFPL4Q7Z7J7 247 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 SLC51BQ86UW2 128 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM252Q8N6L7 170 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 NPBQ8NG41 125 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms