RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SPSB3Q6PJ21 355 aa17.8■□□□□ 0.44
CCM2-206ENST00000474617 SSX9Q7RTT3 188 aa17.8■□□□□ 0.44
CCM2-206ENST00000474617 OR5B3Q8NH48 314 aa17.8■□□□□ 0.44
CCM2-206ENST00000474617 RAB1CQ92928 201 aa17.8■□□□□ 0.44
CCM2-206ENST00000474617 TMEM231Q9H6L2 316 aa17.8■□□□□ 0.44
CCM2-206ENST00000474617 RBFOX3A6NFN3 312 aa17.79■□□□□ 0.44
CCM2-206ENST00000474617 IGHV1-8P0DP01 117 aa17.79■□□□□ 0.44
CCM2-206ENST00000474617 CCL3L1P16619 93 aa17.79■□□□□ 0.44
CCM2-206ENST00000474617 HOXA1P49639 335 aaPredicted RBP17.79■□□□□ 0.44
CCM2-206ENST00000474617 C1orf229Q6ZS94 237 aaPredicted RBP17.79■□□□□ 0.44
CCM2-206ENST00000474617 DTX2Q86UW9 622 aa17.79■□□□□ 0.44
CCM2-206ENST00000474617 SFT2D1Q8WV19 159 aa17.79■□□□□ 0.44
CCM2-206ENST00000474617 NEIL1Q96FI4 390 aaPredicted RBP17.79■□□□□ 0.44
CCM2-206ENST00000474617 UPK2O00526 184 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 FCN3O75636 299 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 IFNA10P01566 189 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 HSPB1P04792 205 aaKnown RBP17.78■□□□□ 0.44
CCM2-206ENST00000474617 MDKP21741 143 aaPredicted RBP17.78■□□□□ 0.44
CCM2-206ENST00000474617 C11orf71Q6IPW1 123 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 OR8B3Q8NGG8 313 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 OR10G4Q8NGN3 311 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 OR4C13Q8NGP0 309 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 OR8B2Q96RD0 313 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 RSG1Q9BU20 258 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 TMEM133Q9H2Q1 129 aa17.78■□□□□ 0.44
CCM2-206ENST00000474617 GOSR1O95249 250 aa17.77■□□□□ 0.44
CCM2-206ENST00000474617 IFNA1P01562 189 aa17.77■□□□□ 0.44
CCM2-206ENST00000474617 PRRX1P54821 245 aa17.77■□□□□ 0.44
CCM2-206ENST00000474617 KHDC3LQ587J8 217 aa17.77■□□□□ 0.44
CCM2-206ENST00000474617 RPRMQ9NS64 109 aa17.77■□□□□ 0.44
CCM2-206ENST00000474617 INS-IGF2F8WCM5 200 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 H0YJW9 148 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 H7C2Y5 167 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 FGF7P21781 194 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 PPT1P50897 306 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 ZNF506Q5JVG8 444 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 UTF1Q5T230 341 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 ST6GALNAC6Q969X2 333 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 MS4A7Q9GZW8 240 aaPredicted RBP17.77■□□□□ 0.43
CCM2-206ENST00000474617 WDR83OSQ9Y284 106 aa17.77■□□□□ 0.43
CCM2-206ENST00000474617 ROS1P08922 2347 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 HCFC1P51610 2035 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 KBTBD11O94819 623 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 USF1P22415 310 aaPredicted RBP17.76■□□□□ 0.43
CCM2-206ENST00000474617 COL8A2P25067 703 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 CD1BP29016 333 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 PRCDQ00LT1 54 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 CDSNQ15517 529 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 GUCA2BQ16661 112 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 ZNF841Q6ZN19 808 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 ETV3LQ6ZN32 361 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 LHX4Q969G2 390 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 FLYWCH2Q96CP2 140 aaKnown RBP17.76■□□□□ 0.43
CCM2-206ENST00000474617 WASHC3Q9Y3C0 194 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 AMMECR1Q9Y4X0 333 aaPredicted RBP17.76■□□□□ 0.43
CCM2-206ENST00000474617 OR51B2Q9Y5P1 312 aa17.76■□□□□ 0.43
CCM2-206ENST00000474617 CACNA1AO00555 2505 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 ATRAIDQ6UW56 229 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 VKORC1L1Q8N0U8 176 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 ABHD12Q8N2K0 398 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 BEND2Q8NDZ0 799 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 SLC24A4Q8NFF2 622 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 NPCDR1Q9BY65 106 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 MRPL20Q9BYC9 149 aaKnown RBP17.75■□□□□ 0.43
CCM2-206ENST00000474617 PLEKHA3Q9HB20 300 aa17.75■□□□□ 0.43
CCM2-206ENST00000474617 NPY1RP25929 384 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 LGALS7P47929 136 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 TGIF2LXQ8IUE1 241 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 CLRN3Q8NCR9 226 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 CLDND2Q8NHS1 167 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 NABP2Q9BQ15 211 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 CHODLQ9H9P2 273 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 TMA7Q9Y2S6 64 aaKnown RBP17.74■□□□□ 0.43
CCM2-206ENST00000474617 PKDREJQ9NTG1 2253 aa17.74■□□□□ 0.43
CCM2-206ENST00000474617 CTXND1A0A1B0GTU2 59 aa17.73■□□□□ 0.43
CCM2-206ENST00000474617 DNASE2O00115 360 aaPredicted RBP17.73■□□□□ 0.43
CCM2-206ENST00000474617 ACOT6Q3I5F7 207 aaPredicted RBP17.73■□□□□ 0.43
CCM2-206ENST00000474617 ZNF787Q6DD87 383 aa17.73■□□□□ 0.43
CCM2-206ENST00000474617 RBMS3Q6XE24 437 aaKnown RBP17.73■□□□□ 0.43
CCM2-206ENST00000474617 RCC1LQ96I51 464 aaKnown RBP17.73■□□□□ 0.43
CCM2-206ENST00000474617 HARBI1Q96MB7 349 aa17.73■□□□□ 0.43
CCM2-206ENST00000474617 P2RX4Q99571 388 aa17.73■□□□□ 0.43
CCM2-206ENST00000474617 ACTR3CQ9C0K3 210 aaPredicted RBP17.73■□□□□ 0.43
CCM2-206ENST00000474617 C9JQL5 133 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 RAB31Q13636 194 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 SOHLH1Q5JUK2 328 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 MRPL41Q8IXM3 137 aaKnown RBP17.72■□□□□ 0.43
CCM2-206ENST00000474617 TMEM167AQ8TBQ9 72 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 FAM122AQ96E09 287 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 SLC39A9Q9NUM3 307 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 NCOR2Q9Y618 2525 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 TRAV3A0A0B4J244 114 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 A0A1W2PN81 502 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 PRSS46E5RG02 174 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 CYB5BO43169 146 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 IGKV1-16P04430 117 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 IFNA4P05014 189 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 LIPFP07098 398 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 CHRNA7P36544 502 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 PLA2G5P39877 138 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms