RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 G0S2P27469 103 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 PCP4P48539 62 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 CASP6P55212 293 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 UBE2G2P60604 165 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 ERVK-16P61578 105 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 OR5I1Q13606 314 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 HLA-DRB5Q30154 266 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 TIGITQ495A1 244 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 CST9LP1Q5W188 147 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 SLC35E4Q6ICL7 350 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 ACSM6Q6P461 480 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 FAM180AQ6UWF9 173 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 SMIM15Q7Z3B0 74 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 HAPLN4Q86UW8 402 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 SLC24A4Q8NFF2 622 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 C22orf15Q8WYQ4 148 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 SMIM12Q96EX1 92 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 IMMP1LQ96LU5 166 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 ALKBH3Q96Q83 286 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 TXN2Q99757 166 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 OPN3Q9H1Y3 402 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 NCOR1P1Q9H4R4 102 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF552Q9H707 407 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 VSIRQ9H7M9 311 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 OSTCQ9NRP0 149 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 AURKAIP1Q9NWT8 199 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-208ENST00000474546 MTCH1Q9NZJ7 389 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 ABI3Q9P2A4 366 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 PCNX3Q9H6A9 2034 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 KIAA1549Q9HCM3 1950 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 RP1P56715 2156 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 ALPK2Q86TB3 2170 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 TRAV24A0A0B4J272 114 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 J3QR06 171 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 IFNL4K9M1U5 179 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 ISLRO14498 428 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 TNFSF12O43508 249 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 WDR1O75083 606 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 GPX1P07203 203 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PMCHP20382 165 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 RAB7AP51149 207 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 DUSP3P51452 185 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 LGALS4P56470 323 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF585BQ52M93 769 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PEAR1Q5VY43 1037 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PQLC2Q6ZP29 291 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 DRAM1Q8N682 238 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 OR2Y1Q8NGV0 311 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PPP1R35Q8TAP8 253 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PRR7Q8TB68 274 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 WIPF2Q8TF74 440 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 IL1F10Q8WWZ1 152 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 HSPB9Q9BQS6 159 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 IL19Q9UHD0 177 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 PPP1R3CQ9UQK1 317 aa6.74□□□□□ -1.33
CCDC93-208ENST00000474546 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-208ENST00000474546 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 PMS2P5A8MQ11 134 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 K7ENP7 123 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 SIAH2O43255 324 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 SPINT2O43291 252 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 LILRA1O75019 489 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
CCDC93-208ENST00000474546 WISP2O76076 250 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 TOX4O94842 621 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 NDUFB4O95168 129 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 TOMM40O96008 361 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1D-33P01593 117 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1-33P01594 117 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1-39P01597 117 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1D-39P04432 117 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 AMY1AP04745 511 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 CD55P08174 381 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
CCDC93-208ENST00000474546 CHRNB4P30926 498 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 ADMP35318 185 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 FOLR3P41439 243 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 CDKN1BP46527 198 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 REG1BP48304 166 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 GNG4P50150 75 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 PRRX1P54821 245 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 B3GALT5-AS1P59052 145 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 CX3CL1P78423 397 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 MRPS11P82912 194 aaKnown RBP6.73□□□□□ -1.33
CCDC93-208ENST00000474546 ARL16Q0P5N6 197 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 OR1C1Q15619 314 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 FBXW9Q5XUX1 488 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 INO80CQ6PI98 192 aaPredicted RBP6.73□□□□□ -1.33
CCDC93-208ENST00000474546 Q6ZPA2 131 aa6.73□□□□□ -1.33
CCDC93-208ENST00000474546 Q6ZRM9 215 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms