RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 XRCC3O43542 346 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 CREBL2O60519 120 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-209ENST00000474432 ACTL6BO94805 426 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 ZNF735P0CB33 412 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 IGHV4-30-4P0DP06 118 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 EXOSC2Q13868 293 aaKnown RBP14.11□□□□□ -0.15
COL7A1-209ENST00000474432 KLK9Q2XQG4 91 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 NECAP1Q8NC96 275 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 FANCD2OSQ96PS1 177 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 DIABLOQ9NR28 239 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 KLK9Q9UKQ9 250 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 ANAPC10Q9UM13 185 aa14.11□□□□□ -0.15
COL7A1-209ENST00000474432 IZUMO1RA6ND01 250 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 MEIS3P1A6NDR6 274 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 NPIPB5A8MRT5 1133 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 A8MZ25 164 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 OR2J3O76001 311 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 RPL27AP46776 148 aaKnown RBP14.1□□□□□ -0.15
COL7A1-209ENST00000474432 ATP5G2Q06055 141 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 RPEL1Q2QD12 228 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 OR5AP2Q8NGF4 316 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 VSTM2AQ8TAG5 236 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 GIMAP1Q8WWP7 306 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 RCHY1Q96PM5 261 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 SLC2A9Q9NRM0 540 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 ZNF257Q9Y2Q1 563 aa14.1□□□□□ -0.15
COL7A1-209ENST00000474432 AIREO43918 545 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 CRYGCP07315 174 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 AREGP15514 252 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 MAS1LP35410 378 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 C15orf32Q32M92 178 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 ZNF818PQ6ZRF7 136 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 SSX9Q7RTT3 188 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 SPAG16Q8N0X2 631 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 ZBTB34Q8NCN2 500 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 TM2D3Q9BRN9 247 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 SLC5A7Q9GZV3 580 aa14.09□□□□□ -0.15
COL7A1-209ENST00000474432 TRAV3A0A0B4J244 114 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 SULT1C2O00338 296 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 RBFOX2O43251 390 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL7A1-209ENST00000474432 NDUFB8O95169 186 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 HRASP01112 189 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 KIR2DS2P43631 304 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 CBX5P45973 191 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 FXYD4P59646 89 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 LSM3P62310 102 aaKnown RBP14.08□□□□□ -0.16
COL7A1-209ENST00000474432 POU2AF1Q16633 256 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 TIMM50Q3ZCQ8 353 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 OR4A47Q6IF82 309 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 TSPAN14Q8NG11 270 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 FYTTD1Q96QD9 318 aaKnown RBP14.08□□□□□ -0.16
COL7A1-209ENST00000474432 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
COL7A1-209ENST00000474432 PPP5D1E7EU14 171 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 CTRB1P17538 263 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 NAT1P18440 290 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 EDN2P20800 178 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 PSMB6P28072 239 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 GNRHRP30968 328 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 TAS2R20P59543 309 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
COL7A1-209ENST00000474432 TATDN3Q17R31 274 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 UBE2NLQ5JXB2 153 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 CTRB2Q6GPI1 263 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 DHRS11Q6UWP2 260 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 CROCCP3Q8IVE0 287 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 S100A16Q96FQ6 103 aaKnown RBP14.07□□□□□ -0.16
COL7A1-209ENST00000474432 CCDC140Q96MF4 163 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 FBXL7Q9UJT9 491 aa14.07□□□□□ -0.16
COL7A1-209ENST00000474432 A0A087WXM4 84 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 H0Y980 276 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 HLA-AP01891 365 aaKnown RBP14.06□□□□□ -0.16
COL7A1-209ENST00000474432 HLA-GP17693 338 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 RFX2P48378 723 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 OR2B8PP59922 312 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 SAMD12Q8N8I0 201 aa14.06□□□□□ -0.16
COL7A1-209ENST00000474432 DYNC2H1Q8NCM8 4307 aaKnown RBP14.05□□□□□ -0.16
COL7A1-209ENST00000474432 UPK2O00526 184 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 TAS2R31P59538 309 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 TMEM17Q86X19 198 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 LYSMD2Q8IV50 215 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 Q8N402 240 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 OR4A5Q8NH83 315 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 S4R3C0 116 aa14.05□□□□□ -0.16
COL7A1-209ENST00000474432 IGLV11-55A0A075B6I3 123 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 IGLC7A0M8Q6 106 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 ZNF785A8K8V0 405 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 C3orf84H3BNL1 204 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 S1PR2O95136 353 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 OR2C1O95371 312 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 HPRT1P00492 218 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 REG1AP05451 166 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 EIF4EP06730 217 aaKnown RBP14.04□□□□□ -0.16
COL7A1-209ENST00000474432 TMEM69Q5SWH9 247 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 OR51H1Q8NH63 302 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 SLC25A46Q96AG3 418 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 MOB3AQ96BX8 217 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 KCTD12Q96CX2 325 aaKnown RBP14.04□□□□□ -0.16
COL7A1-209ENST00000474432 EHFQ9NZC4 300 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms