RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 HAVCR2Q8TDQ0 301 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 ACOT12Q8WYK0 555 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 SMIM19Q96E16 107 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 GNPNAT1Q96EK6 184 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 ATP6V1G3Q96LB4 118 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CFAP53Q96M91 514 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 SERPINI1Q99574 410 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CHST6Q9GZX3 395 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 PRELID1Q9Y255 219 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 POLR1DQ9Y2S0 133 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 HELZ2Q9BYK8 2649 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 A0A0D9SEW6 157 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 COX7A2LO14548 114 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 CIAO1O76071 339 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 UCHL3P15374 230 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 UGT2B7P16662 529 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 MYL12AP19105 171 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 AQP4P55087 323 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 POLR2GP62487 172 aaKnown RBP eCLIP0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 JOSD1Q15040 202 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 SURF2Q15527 256 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 C4orf26Q17RF5 130 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 CST9Q5W186 159 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 FAM19A5Q7Z5A7 132 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 SLC22A24Q8N4F4 322 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 ZNF676Q8N7Q3 588 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 OR7G1Q8NGA0 311 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 OR2T27Q8NH04 317 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 TESCQ96BS2 214 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 KCTD7Q96MP8 289 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 DERL2Q9GZP9 239 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 DRC3Q9H069 523 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 MS4A6AQ9H2W1 248 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 WDR54Q9H977 334 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 HRASLSQ9HDD0 168 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 EURLQ9NYK6 297 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 OR5AC2Q9NZP5 309 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 RSL24D1Q9UHA3 163 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 SCN9AQ15858 1988 aa0.86□□□□□ -2.27
ECHDC1-213ENST00000474240 IGKV1-9A0A0C4DH69 117 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 A0A1B0GV50 99 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 ITGB1BP1O14713 200 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 PFDN6O15212 129 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 BIRC5O15392 142 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 CALUO43852 315 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 ADAP1O75689 374 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 OCM2P0CE71 109 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 SULT1A3P0DMM9 295 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 SULT1A4P0DMN0 295 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 KCNE1P15382 129 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 S100A7P31151 101 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 CASQ1P31415 396 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 OGFRL1Q5TC84 451 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 CLEC6AQ6EIG7 209 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 GPHB5Q86YW7 130 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 C12orf29Q8N999 325 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 ROPN1LQ96C74 230 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 CMTM5Q96DZ9 223 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 WDR90Q96KV7 1748 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 DKKL1Q9UK85 242 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 C15orf41Q9Y2V0 281 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
ECHDC1-213ENST00000474240 FLG2Q5D862 2391 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 TMED7-TICAM2A0A0A6YYA0 188 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 IRGMA1A4Y4 181 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 OR51F1A6NGY5 319 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 YEATS4O95619 227 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 KRT75O95678 551 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 NPPAP01160 153 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 IL3P08700 152 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 CLDN12P56749 244 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 OR4D2P58180 307 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 MED21Q13503 144 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 MOGQ16653 247 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 FAM173BQ6P4H8 233 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 SBSNQ6UWP8 590 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 SSX8Q7RTT4 187 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 AAED1Q7RTV5 226 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 UMODL1-AS1Q8N2C9 162 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 PACRGLQ8N7B6 248 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 GPR32P1Q8NGA4 272 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 OR8B3Q8NGG8 313 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 MCFD2Q8NI22 146 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 EEF1AKMT1Q8WVE0 214 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 DNAJB3Q8WWF6 145 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 ANKRD7Q92527 254 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 ERMAPQ96PL5 475 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 BBS2Q9BXC9 721 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 YIPF3Q9GZM5 350 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 CXorf21Q9HAI6 301 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 FGFR1OP2Q9NVK5 253 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 GMEB1Q9Y692 573 aa0.84□□□□□ -2.27
ECHDC1-213ENST00000474240 SIPA1L1O43166 1804 aa0.84□□□□□ -2.28
ECHDC1-213ENST00000474240 FN1P02751 2386 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 DSCAMO60469 2012 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 TRAV14DV4A0A0A6YYC5 116 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 A0A0A6YYH2 397 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 TRBV10-2A0A0K0K1G8 114 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 TINCRA0A1B0GVN0 87 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 A6NJ64 397 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms