RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
USF1-205ENST00000473969 INPP1P49441 399 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 RAB9AP51151 201 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 PPP5CP53041 499 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 LHFPL1Q86WI0 220 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 RNF152Q8N8N0 203 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 CCDC71LQ8N9Z2 235 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 OR4D10Q8NGI6 311 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 TMEM167AQ8TBQ9 72 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 SPIN2AQ99865 258 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 PRRT1Q99946 306 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 SPIN2BQ9BPZ2 258 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 MCUBQ9NWR8 336 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 COPZ2Q9P299 210 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
USF1-205ENST00000473969 VSIG4Q9Y279 399 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 S1PR2O95136 353 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 IGLV1-40P01703 118 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SERPINE2P07093 398 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
USF1-205ENST00000473969 FAAP20Q6NZ36 180 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 CCDC190Q86UF4 302 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SLC25A42Q86VD7 318 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 PUSL1Q8N0Z8 303 aaKnown RBP10.75□□□□□ -0.69
USF1-205ENST00000473969 TOMM5Q8N4H5 51 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 OR5T1Q8NG75 326 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 OR4C16Q8NGL9 310 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 OR6Q1Q8NGQ2 317 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
USF1-205ENST00000473969 UBE2E2Q96LR5 201 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SCGB3A2Q96PL1 93 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SLA2Q9H6Q3 261 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
USF1-205ENST00000473969 H3BUA1 57 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 SNAPC5O75971 98 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 MYCNOSP40205 109 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 RPL27AP46776 148 aaKnown RBP10.74□□□□□ -0.69
USF1-205ENST00000473969 PIGPP57054 158 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 TPPP2P59282 170 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 RND3P61587 244 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 OR4A47Q6IF82 309 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 OR13C8Q8NGS7 320 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 MS4A10Q96PG2 267 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 KLK15Q9H2R5 256 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
USF1-205ENST00000473969 V9GYH0 126 aa10.74□□□□□ -0.69
USF1-205ENST00000473969 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 ATG12O94817 140 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 KRASP01116 189 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 TRGV3P03979 118 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 CTSDP07339 412 aaPredicted RBP10.73□□□□□ -0.69
USF1-205ENST00000473969 ZNF735P0CB33 412 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 APELAP0DMC3 54 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 RPA2P15927 270 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 HLA-GP17693 338 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 PI3P19957 117 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 ETV6P41212 452 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 RAB25P57735 213 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 SURF2Q15527 256 aaPredicted RBP10.73□□□□□ -0.69
USF1-205ENST00000473969 POU2AF1Q16633 256 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 ZNF57Q68EA5 555 aaPredicted RBP10.73□□□□□ -0.69
USF1-205ENST00000473969 ZNF491Q8N8L2 437 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 OR51S1Q8NGJ8 323 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 DPF1Q92782 380 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
USF1-205ENST00000473969 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 COMMD5Q9GZQ3 224 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
USF1-205ENST00000473969 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 TEX13DA0A0J9YY54 714 aaPredicted RBP10.72□□□□□ -0.69
USF1-205ENST00000473969 C3orf85A0A1B0GTC6 90 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 C13orf42A0A1B0GVH6 325 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 CCL24O00175 119 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 UPK2O00526 184 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 SOX15O60248 233 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 B3GALNT1O75752 331 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 OR9G9P0C7N8 305 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 G6PCP35575 357 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 SSBP2P81877 361 aaPredicted RBP10.72□□□□□ -0.69
USF1-205ENST00000473969 MRGPRG-AS1Q2M3A8 158 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 FOXB2Q5VYV0 432 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 TRIQKQ629K1 86 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 C18orf65Q6ZTR6 163 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 CASTOR1Q8WTX7 329 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
USF1-205ENST00000473969 H0Y980 276 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 DHFRP00374 187 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 ZNF79Q15937 498 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 TRIM16LQ309B1 348 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 ZNF585BQ52M93 769 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms