RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RPL39P5Q59GN2 51 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 LRP11Q86VZ4 500 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 TMEM178AQ8NBL3 297 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF114Q8NC26 417 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 OR5T1Q8NG75 326 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 OR6C3Q9NZP0 311 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 FCGR3BO75015 233 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 IGHG3P01860 377 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 GYPAP02724 150 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 GNB1P62873 340 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 ARSJQ5FYB0 599 aaPredicted RBP9.07□□□□□ -0.96
C9orf3-214ENST00000473778 FAM90A1Q86YD7 464 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 LRRC29Q8WV35 223 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 C1orf159Q96HA4 380 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 PATZ1Q9HBE1 687 aaKnown RBP9.07□□□□□ -0.96
C9orf3-214ENST00000473778 EP300Q09472 2414 aaPredicted RBP9.07□□□□□ -0.96
C9orf3-214ENST00000473778 TNCP24821 2201 aa9.07□□□□□ -0.96
C9orf3-214ENST00000473778 CACNA1HO95180 2353 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 TRBV20OR9-2A0A075B6H5 130 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 IGHV3OR15-7A0A075B7D8 119 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 IGHV1-18A0A0C4DH31 117 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 H7BYZ3 331 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 IFNL4K9M1U5 179 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 KITLGP21583 273 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 CD82P27701 267 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 CDC34P49427 236 aaPredicted RBP9.06□□□□□ -0.96
C9orf3-214ENST00000473778 CCL11P51671 97 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 EDDM3BP56851 147 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 HSD17B10Q99714 261 aaKnown RBP9.06□□□□□ -0.96
C9orf3-214ENST00000473778 TMEM204Q9BSN7 226 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 WDR83OSQ9Y284 106 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 IGHV2OR16-5A0A0B4J2B6 119 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 PRSS46E5RG02 174 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 HRASP01112 189 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 CD1BP29016 333 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 CHRNA7P36544 502 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 FAM3BP58499 235 aaPredicted RBP9.06□□□□□ -0.96
C9orf3-214ENST00000473778 MORN2Q502X0 79 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF66Q6ZN08 573 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 ZNRF1Q8ND25 227 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 LEAP2Q969E1 77 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 DIRC2Q96SL1 478 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 PLCE1Q9P212 2302 aa9.06□□□□□ -0.96
C9orf3-214ENST00000473778 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-214ENST00000473778 IGLV1-44P01699 117 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 OR4A8P0C604 315 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 PRDX2P32119 198 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 LOXL3P58215 753 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 PAX5Q02548 391 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 SMIM21Q3B7S5 101 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 LINC01551Q86U37 167 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 OR1P1Q8NH06 330 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 NEIL1Q96FI4 390 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-214ENST00000473778 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-214ENST00000473778 TAAR6Q96RI8 345 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 DUSP13Q9UII6 198 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
C9orf3-214ENST00000473778 TNFSF13O75888 250 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 C1QTNF9P0C862 333 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 HTD2P86397 168 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 FAM201AQ5SY85 155 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 ABHD12Q8N2K0 398 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF709Q8N972 641 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 OR2Z1Q8NG97 314 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 TMEM37Q8WXS4 190 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 MGST2Q99735 147 aa9.05□□□□□ -0.96
C9orf3-214ENST00000473778 CNOT1A5YKK6 2376 aaKnown RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TTC28Q96AY4 2481 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF891A8MT65 544 aaPredicted RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 PPP5D1E7EU14 171 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 GFRA3O60609 400 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 NDUFB4O95168 129 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 VDAC2P45880 294 aaPredicted RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 GPR12P47775 334 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TEX38Q6PEX7 206 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 DUX4L9Q6RFH8 374 aaPredicted RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TGIF2LYQ8IUE0 185 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 MS4A5Q9H3V2 200 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 M0R1X1 148 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 SPINT2O43291 252 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TCF21O43680 179 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 RPL29P47914 159 aaKnown RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 RELBQ01201 579 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TRIP6Q15654 476 aaKnown RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 IQCJQ1A5X6 159 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 COA6Q5JTJ3 125 aaKnown RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 ACTL10Q5JWF8 245 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 MBNL2Q5VZF2 373 aaKnown RBP9.04□□□□□ -0.96
C9orf3-214ENST00000473778 MIC13Q5XKP0 118 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 SEM1Q6ZVN7 128 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 C22orf15Q8WYQ4 148 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms