RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PRR25Q96S07 402 aa8.93□□□□□ -0.98
CPNE1-222ENST00000473373 RANGRFQ9HD47 186 aaPredicted RBP8.93□□□□□ -0.98
CPNE1-222ENST00000473373 TRIM64CA6NLI5 447 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 RLN1P04808 185 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 IFNA6P05013 189 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 SMIM18P0DKX4 95 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 DEFA4P12838 97 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 ZNF182P17025 639 aaPredicted RBP8.92□□□□□ -0.98
CPNE1-222ENST00000473373 ZP3P21754 424 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 HRH1P35367 487 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 EGFEM1PQ0D2K5 195 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 KIAA0141Q14154 515 aaPredicted RBP8.92□□□□□ -0.98
CPNE1-222ENST00000473373 RPEL1Q2QD12 228 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 ZNF818PQ6ZRF7 136 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 ZNF429Q86V71 674 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 GIMAP1Q8WWP7 306 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 DLX4Q92988 240 aaPredicted RBP8.92□□□□□ -0.98
CPNE1-222ENST00000473373 RHOVQ96L33 236 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 TINAGL1Q9GZM7 467 aaPredicted RBP8.92□□□□□ -0.98
CPNE1-222ENST00000473373 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
CPNE1-222ENST00000473373 EXTL2Q9UBQ6 330 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 ADAM30Q9UKF2 790 aa8.92□□□□□ -0.98
CPNE1-222ENST00000473373 GABARAPO95166 117 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 DHFRP00374 187 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 HPRT1P00492 218 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 IGLV2-14P01704 120 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 PRH1P02810 166 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 RPA2P15927 270 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 ELK1P19419 428 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 RCVRNP35243 200 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 MAS1LP35410 378 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 RPL8P62917 257 aaKnown RBP8.91□□□□□ -0.98
CPNE1-222ENST00000473373 ATP5G2Q06055 141 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 DYRK1AQ13627 763 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 MSMO1Q15800 293 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 C10orf55Q5SWW7 151 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 CLVS1Q8IUQ0 354 aaPredicted RBP8.91□□□□□ -0.98
CPNE1-222ENST00000473373 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 CD300LFQ8TDQ1 290 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 USMG5Q96IX5 58 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 SCPEP1Q9HB40 452 aa8.91□□□□□ -0.98
CPNE1-222ENST00000473373 ZNF256Q9Y2P7 627 aaPredicted RBP8.91□□□□□ -0.98
CPNE1-222ENST00000473373 HMX3A6NHT5 357 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 PGAM2P15259 253 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 NQO2P16083 231 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 RHOGP84095 191 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 EXOSC2Q13868 293 aaKnown RBP8.9□□□□□ -0.98
CPNE1-222ENST00000473373 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 LPCAT3Q6P1A2 487 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 MOB3AQ96BX8 217 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 COMMD5Q9GZQ3 224 aa8.9□□□□□ -0.98
CPNE1-222ENST00000473373 PEF1Q9UBV8 284 aaKnown RBP8.9□□□□□ -0.98
CPNE1-222ENST00000473373 FAM223BA6NKX1 122 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 GPR31O00270 319 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 SNAPC5O75971 98 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 OR2J3O76001 311 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 S1PR2O95136 353 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 HLA-GP17693 338 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 TAS2R31P59538 309 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 SSBP2P81877 361 aaPredicted RBP8.89□□□□□ -0.99
CPNE1-222ENST00000473373 CTF1Q16619 201 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 PHLDA2Q53GA4 152 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 VAX1Q5SQQ9 334 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 OR4A47Q6IF82 309 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 ADAD2Q8NCV1 583 aaKnown RBP8.89□□□□□ -0.99
CPNE1-222ENST00000473373 OR4A5Q8NH83 315 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 TMEM167AQ8TBQ9 72 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 GPX8Q8TED1 209 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 C15orf40Q8WUR7 153 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 HINT2Q9BX68 163 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 ZNF257Q9Y2Q1 563 aa8.89□□□□□ -0.99
CPNE1-222ENST00000473373 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 CYB5BO43169 146 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 RBFOX2O43251 390 aaKnown RBP eCLIP8.88□□□□□ -0.997e-7■□□□□ 10.1
CPNE1-222ENST00000473373 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
CPNE1-222ENST00000473373 REG1AP05451 166 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 GNRHRP30968 328 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 MECP2P51608 486 aaKnown RBP8.88□□□□□ -0.99
CPNE1-222ENST00000473373 SYNJ2BPP57105 145 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 RNASE10Q5GAN6 216 aaKnown RBP8.88□□□□□ -0.99
CPNE1-222ENST00000473373 ACSM6Q6P461 480 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 DHRS11Q6UWP2 260 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 PUSL1Q8N0Z8 303 aaKnown RBP8.88□□□□□ -0.99
CPNE1-222ENST00000473373 FCAMRQ8WWV6 532 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 AKIP1Q9NQ31 210 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 TMEM140Q9NV12 185 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 BET1LQ9NYM9 111 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 COMMD9Q9P000 198 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 SCOCQ9UIL1 159 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 FBXL7Q9UJT9 491 aa8.88□□□□□ -0.99
CPNE1-222ENST00000473373 M0QYG6 137 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 PGLYRP1O75594 196 aaPredicted RBP8.87□□□□□ -0.99
CPNE1-222ENST00000473373 KRASP01116 189 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 NAT1P18440 290 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 F2RP25116 425 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 LPAR6P43657 344 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 EIF4EBP1Q13541 118 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 407.6 ms