RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 HAVCR2Q8TDQ0 301 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 IMP3Q9NV31 184 aaKnown RBP1.3□□□□□ -2.2
CLK1-209ENST00000472679 NAT8Q9UHE5 227 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 KIF15Q9NS87 1388 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 MYOFQ9NZM1 2061 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 INTS1Q8N201 2190 aaKnown RBP1.3□□□□□ -2.2
CLK1-209ENST00000472679 DIDO1Q9BTC0 2240 aaKnown RBP1.3□□□□□ -2.2
CLK1-209ENST00000472679 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
CLK1-209ENST00000472679 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
CLK1-209ENST00000472679 HLA-DRAP01903 254 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 CD40LGP29965 261 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 RPL30P62888 115 aaKnown RBP1.29□□□□□ -2.2
CLK1-209ENST00000472679 SKP1P63208 163 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 MGAT3Q09327 533 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 Q1T7F1 81 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 FAM173BQ6P4H8 233 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 C15orf53Q8NAA6 179 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 KCTD7Q96MP8 289 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 CXorf21Q9HAI6 301 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 SPANXB1Q9NS25 103 aaPredicted RBP1.29□□□□□ -2.2
CLK1-209ENST00000472679 ANAPC10Q9UM13 185 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 PRELID1Q9Y255 219 aa1.29□□□□□ -2.2
CLK1-209ENST00000472679 M0QX08 132 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 PLA2G10O15496 165 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 ORC5O43913 435 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 NSA2O95478 260 aaKnown RBP1.28□□□□□ -2.2
CLK1-209ENST00000472679 OCMP0CE72 109 aaPredicted RBP1.28□□□□□ -2.2
CLK1-209ENST00000472679 PPP1R1AQ13522 171 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 ARHGAP11BQ3KRB8 267 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 C1orf194Q5T5A4 169 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 C9orf163Q8N9P6 203 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 MBD3L1Q8WWY6 194 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 GMEB1Q9Y692 573 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 SCAF11Q99590 1463 aaKnown RBP1.28□□□□□ -2.2
CLK1-209ENST00000472679 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
CLK1-209ENST00000472679 F8W036 122 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 TRAPPC2LH3BP13 241 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 MRPS14O60783 128 aaKnown RBP1.27□□□□□ -2.21
CLK1-209ENST00000472679 DDTP30046 118 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 AKR1C1Q04828 323 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 CDK5R1Q15078 307 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 TMEM251Q8N6I4 163 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 PLEKHJ1Q9NW61 149 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 DLG5Q8TDM6 1919 aa1.27□□□□□ -2.21
CLK1-209ENST00000472679 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 LINC00854A0A1B0GVQ3 168 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 RPSAP08865 295 aaKnown RBP1.26□□□□□ -2.21
CLK1-209ENST00000472679 CCL1P22362 96 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 CDC34P49427 236 aaPredicted RBP1.26□□□□□ -2.21
CLK1-209ENST00000472679 EMX1Q04741 257 aaPredicted RBP1.26□□□□□ -2.21
CLK1-209ENST00000472679 TMED1Q13445 227 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 FAM27BQ5VT28 67 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 RPP25LQ8N5L8 163 aaKnown RBP1.26□□□□□ -2.21
CLK1-209ENST00000472679 ADAT1Q9BUB4 502 aaKnown RBP1.26□□□□□ -2.21
CLK1-209ENST00000472679 CHST6Q9GZX3 395 aa1.26□□□□□ -2.21
CLK1-209ENST00000472679 A0A1B0GW54 56 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 OR51F1A6NGY5 319 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 TRGC1P0CF51 173 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 HIST1H4AP62805 103 aaKnown RBP1.25□□□□□ -2.21
CLK1-209ENST00000472679 SSX8Q7RTT4 187 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 DYNAPQ8N1N2 210 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 Q8N2B8 174 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 TMEM161BQ8NDZ6 487 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 ACOT12Q8WYK0 555 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 GPR84Q9NQS5 396 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 DKKL1Q9UK85 242 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 TIMM22Q9Y584 194 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 HEATR5BQ9P2D3 2071 aa1.25□□□□□ -2.21
CLK1-209ENST00000472679 ROS1P08922 2347 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 TRAPPC13A5PLN9 417 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 MEIS3P1A6NDR6 274 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 GOLGA8KD6RF30 607 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 GOLGA8MH3BSY2 632 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 LST1O00453 97 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 IL3P08700 152 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 MSNP26038 577 aaKnown RBP1.24□□□□□ -2.21
CLK1-209ENST00000472679 CTAG1AP78358 180 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 TNFAIP6P98066 277 aaPredicted RBP1.24□□□□□ -2.21
CLK1-209ENST00000472679 SURF2Q15527 256 aaPredicted RBP1.24□□□□□ -2.21
CLK1-209ENST00000472679 TNFAIP8L3Q5GJ75 292 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 C9orf64Q5T6V5 341 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 FAM78BQ5VT40 261 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 CST9Q5W186 159 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 TNFAIP8L2Q6P589 184 aaPredicted RBP1.24□□□□□ -2.21
CLK1-209ENST00000472679 PLEKHG7Q6ZR37 379 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 TMEM86AQ8N2M4 240 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 TESCQ96BS2 214 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 POLR1DQ9Y2S0 133 aa1.24□□□□□ -2.21
CLK1-209ENST00000472679 SMARCA4P51532 1647 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 IBA57-AS1B1ANH7 110 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 LEPROTO15243 131 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 TYMSP04818 313 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 PRB3Q04118 309 aaPredicted RBP1.23□□□□□ -2.21
CLK1-209ENST00000472679 ELOBQ15370 118 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 Q8N402 240 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 SLC22A24Q8N4F4 322 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 JOSD2Q8TAC2 188 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 OR8D2Q9GZM6 311 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 MAP1LC3AQ9H492 121 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 C15orf41Q9Y2V0 281 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms