RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 KLF2Q9Y5W3 355 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 TGIF2-C20orf24A0A0A6YYL0 155 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 GFRA3O60609 400 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 NQO2P16083 231 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 AGAP20933 346 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 PRB3Q04118 309 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 OR4A47Q6IF82 309 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 FAM122AQ96E09 287 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 TCF19Q9Y242 345 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 C1orf196B1AJZ1 125 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 DLX1P56177 255 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 B2MP61769 119 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 GNB2P62879 340 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 VWC2Q2TAL6 325 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 PINX1Q96BK5 328 aaKnown RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 BIN3Q9NQY0 253 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 REG1BP48304 166 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 DIAPH2-AS1Q14236 149 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 CIB3Q96Q77 187 aaPredicted RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 HINT2Q9BX68 163 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 SEBOXQ9HB31 216 aaPredicted RBP12.32□□□□□ -0.44
UBXN11-213ENST00000472155 IDI2-AS1Q9NZ38 188 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 JKAMPQ9P055 326 aa12.32□□□□□ -0.44
UBXN11-213ENST00000472155 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 TNFSF4P23510 183 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 GRNP28799 593 aaKnown RBP12.31□□□□□ -0.44
UBXN11-213ENST00000472155 CD1BP29016 333 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 RAB5BP61020 215 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 ELOBQ15370 118 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 HEPN1Q6WQI6 88 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 SOX15O60248 233 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 PLAUP00749 431 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 SPCS3P61009 180 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 ERVK-16P61578 105 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 RPUSD4Q96CM3 377 aaKnown RBP12.31□□□□□ -0.44
UBXN11-213ENST00000472155 COL25A1Q9BXS0 654 aaPredicted RBP12.31□□□□□ -0.44
UBXN11-213ENST00000472155 ZNF835Q9Y2P0 537 aa12.31□□□□□ -0.44
UBXN11-213ENST00000472155 K7ENP7 123 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 IRF2P14316 349 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 SLC25A10Q9UBX3 287 aaPredicted RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 VAX2Q9UIW0 290 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 RBFOX2O43251 390 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 YIF1AO95070 293 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 RPS10P46783 165 aaKnown RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 HOXA1P49639 335 aaPredicted RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 RNF212Q495C1 297 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 MGST2Q99735 147 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 UNKLQ9H9P5 680 aaKnown RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 RPUSD1Q9UJJ7 312 aaKnown RBP12.3□□□□□ -0.44
UBXN11-213ENST00000472155 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
UBXN11-213ENST00000472155 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 E7EQL1 145 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 ELOVL5Q9NYP7 299 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 CTSZQ9UBR2 303 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 CTXND1A0A1B0GTU2 59 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 SHISA9B4DS77 424 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 LYNX1G3V0Z9 82 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 PAGE4O60829 102 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 IFNA4P05014 189 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 LYNX1P0DP58 116 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 RAB7AP51149 207 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 UBE2G2P60604 165 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 RPL31P62899 125 aaKnown RBP12.29□□□□□ -0.44
UBXN11-213ENST00000472155 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-213ENST00000472155 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-213ENST00000472155 ARSJQ5FYB0 599 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-213ENST00000472155 TMEM200BQ69YZ2 307 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 ZNF709Q8N972 641 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 OR51G1Q8NGK1 321 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 TMEM204Q9BSN7 226 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 ABCA1O95477 2261 aa12.29□□□□□ -0.44
UBXN11-213ENST00000472155 NPPCP23582 126 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms