RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 C10orf55Q5SWW7 151 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 PPP1R27Q86WC6 154 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 DMBX1Q8NFW5 382 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 OR52B4Q8NGK2 314 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 NOL4LQ96MY1 436 aaPredicted RBP11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 MDFIQ99750 246 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 ZNF430Q9H8G1 570 aaPredicted RBP11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 NUBP2Q9Y5Y2 271 aa11.56□□□□□ -0.56
SMARCD3-207ENST00000472103 C9orf170A2RU37 121 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 UPK2O00526 184 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 KBTBD11O94819 623 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 OR2A4O95047 310 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 OR4E1P0C645 316 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 P0C879 139 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 VAMP1P23763 118 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 MECP2P51608 486 aaKnown RBP11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 PRSS8Q16651 343 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 CASTOR1Q8WTX7 329 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 SEC22CQ9BRL7 303 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 OR51J1Q9H342 316 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 PALMDQ9NP74 551 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
SMARCD3-207ENST00000472103 FBN1P35555 2871 aaKnown RBP11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 A0A1B0GW64 132 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 CLPSL1A2RUU4 121 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 DBX1A6NMT0 343 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 E7EUB6 86 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 B3GALNT1O75752 331 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 KRTAP10-3P60369 221 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 UBE2MP61081 183 aaKnown RBP11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 ERVK-16P61578 105 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 GNB1P62873 340 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 DHRS2Q13268 280 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 DCTN2Q13561 401 aaKnown RBP11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 OR4F5Q8NH21 305 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 OR2T6Q8NHC8 308 aa11.54□□□□□ -0.56
SMARCD3-207ENST00000472103 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 PROK1P58294 105 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 FXYD3Q14802 87 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 TNXAQ16473 311 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 ARSJQ5FYB0 599 aaPredicted RBP11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 Q6ZRM9 215 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 SLC35G3Q8N808 338 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 RBPMSQ93062 196 aaKnown RBP11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 GPR146Q96CH1 333 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 ALX4Q9H161 411 aaPredicted RBP11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 PARP11Q9NR21 331 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 RNF114Q9Y508 228 aa11.53□□□□□ -0.56
SMARCD3-207ENST00000472103 G3V318 75 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 OPN1MWP04001 364 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 OR2B8PP59922 312 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 FOXL1Q12952 345 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 MMD2Q8IY49 270 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 LGI3Q8N145 548 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 STPG2Q8N412 459 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 WIPF2Q8TF74 440 aaPredicted RBP11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 ARPC1AQ92747 370 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 MMP24Q9Y5R2 645 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 WSB1Q9Y6I7 421 aa11.52□□□□□ -0.57
SMARCD3-207ENST00000472103 INMT-MINDY4F8WBC2 141 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 HAX1O00165 279 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 APELAP0DMC3 54 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 ANXA3P12429 323 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 AKR1C2P52895 323 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 SRSF4Q08170 494 aaKnown RBP11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 PLET1Q6UQ28 207 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 CADM3Q8N126 398 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms