RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CITED4Q96RK1 184 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 GPHA2Q96T91 129 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 THAP7Q9BT49 309 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-213ENST00000471978 DPPA5A6NC42 116 aa17.11■□□□□ 0.33
C9orf3-213ENST00000471978 IL6RP08887 468 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-213ENST00000471978 PTHLHP12272 177 aa17.11■□□□□ 0.33
C9orf3-213ENST00000471978 FCGR2CP31995 323 aa17.11■□□□□ 0.33
C9orf3-213ENST00000471978 RPL27AP46776 148 aaKnown RBP17.11■□□□□ 0.33
C9orf3-213ENST00000471978 SECTM1Q8WVN6 248 aa17.11■□□□□ 0.33
C9orf3-213ENST00000471978 FYTTD1Q96QD9 318 aaKnown RBP17.11■□□□□ 0.33
C9orf3-213ENST00000471978 NPIPB5A8MRT5 1133 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 E7EUB6 86 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 TNFSF12O43508 249 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 HRASP01112 189 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 MAS1LP35410 378 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 MECP2P51608 486 aaKnown RBP17.1■□□□□ 0.33
C9orf3-213ENST00000471978 FAM209BQ5JX69 171 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 C19orf35Q6ZS72 473 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 SSX9Q7RTT3 188 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 HOGA1Q86XE5 327 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 OR13F1Q8NGS4 319 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 OR2K2Q8NGT1 345 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 TUBA4BQ9H853 241 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 PALMDQ9NP74 551 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 CCL28Q9NRJ3 127 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 FBXL7Q9UJT9 491 aa17.1■□□□□ 0.33
C9orf3-213ENST00000471978 A0A0A6YYH2 397 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 A6NJ64 397 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 PPP5D1E7EU14 171 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 ZNF735P0CB33 412 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 KIR2DS2P43631 304 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 NEDD8Q15843 81 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 HAGHQ16775 308 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 KCTD12Q96CX2 325 aaKnown RBP17.09■□□□□ 0.33
C9orf3-213ENST00000471978 SLC2A9Q9NRM0 540 aa17.09■□□□□ 0.33
C9orf3-213ENST00000471978 A0A1B0GW64 132 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 PPYP01298 95 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 MSMO1Q15800 293 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 ADAMTSL5Q6ZMM2 481 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 SPATA25Q9BR10 227 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 AUNIPQ9H7T9 357 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 DIABLOQ9NR28 239 aa17.08■□□□□ 0.32
C9orf3-213ENST00000471978 TENM2Q9NT68 2774 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 GGCTO75223 188 aaKnown RBP17.07■□□□□ 0.32
C9orf3-213ENST00000471978 HLA-AP01891 365 aaKnown RBP17.07■□□□□ 0.32
C9orf3-213ENST00000471978 FCER2P06734 321 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 AREGP15514 252 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 RPL8P62917 257 aaKnown RBP17.07■□□□□ 0.32
C9orf3-213ENST00000471978 CD300EQ496F6 205 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-213ENST00000471978 ZBTB34Q8NCN2 500 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 SLC5A7Q9GZV3 580 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 DMRT1Q9Y5R6 373 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 CSMD3Q7Z407 3707 aa17.07■□□□□ 0.32
C9orf3-213ENST00000471978 DHFRP00374 187 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 IGHV3-23P01764 117 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 CRYGCP07315 174 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 PSMB6P28072 239 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 SPAG16Q8N0X2 631 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 DYNLRB2Q8TF09 96 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 FANCD2OSQ96PS1 177 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 AIFM2Q9BRQ8 373 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 EDA2RQ9HAV5 297 aa17.06■□□□□ 0.32
C9orf3-213ENST00000471978 SACSQ9NZJ4 4579 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 SULT1C2O00338 296 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 NDUFB8O95169 186 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 OR2C1O95371 312 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 MYOD1P15172 320 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 HLA-GP17693 338 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 FXYD4P59646 89 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 CD81P60033 236 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 OR4A47Q6IF82 309 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 OR4A5Q8NH83 315 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 ISOC1Q96CN7 298 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 HRASLSQ9HDD0 168 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 BET1LQ9NYM9 111 aa17.05■□□□□ 0.32
C9orf3-213ENST00000471978 C2orf70A6NJV1 201 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 RBFOX2O43251 390 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■■■□ 20.5
C9orf3-213ENST00000471978 FOLR2P14207 255 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CTRB1P17538 263 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CBX5P45973 191 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CATR1Q13166 79 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 DEFB114Q30KQ6 69 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 TIMM50Q3ZCQ8 353 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 KCTD21Q4G0X4 260 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 ZFAND6Q6FIF0 208 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CTRB2Q6GPI1 263 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CLEC19AQ6UXS0 136 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 LAX1Q8IWV1 398 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 OR5AP2Q8NGF4 316 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 CCDC140Q96MF4 163 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 NEURL2Q9BR09 285 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 PLEKHA3Q9HB20 300 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 S4R3C0 116 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 RYR2Q92736 4967 aa17.04■□□□□ 0.32
C9orf3-213ENST00000471978 MEIS3P1A6NDR6 274 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 ZNF785A8K8V0 405 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 LGALS9O00182 355 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 TMEM127O75204 238 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 REG1AP05451 166 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 DEFA4P12838 97 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms