RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CFHR3Q02985 330 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 ZNF57Q68EA5 555 aaPredicted RBP11.87□□□□□ -0.51
SNX13-205ENST00000471744 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 S100ZQ8WXG8 99 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
SNX13-205ENST00000471744 HRASLSQ9HDD0 168 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 ZFP57Q9NU63 452 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
SNX13-205ENST00000471744 H0Y980 276 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 S1PR2O95136 353 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
SNX13-205ENST00000471744 SLC6A1P30531 599 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 LPAR6P43657 344 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 TNXAQ16473 311 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 ECSCRQ19T08 205 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 PRR31Q5SQ13 230 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 UNQ5815/PRO19632Q6UWF5 114 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 VKORC1L1Q8N0U8 176 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 RNF152Q8N8N0 203 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 MINDY2Q8NBR6 621 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 DMBX1Q8NFW5 382 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 GRPEL2Q8TAA5 225 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 R3HDM4Q96D70 268 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
SNX13-205ENST00000471744 GPR132Q9UNW8 380 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 FOXA2Q9Y261 457 aaPredicted RBP11.86□□□□□ -0.51
SNX13-205ENST00000471744 WSB1Q9Y6I7 421 aa11.86□□□□□ -0.51
SNX13-205ENST00000471744 NAP1L6A6NFF2 107 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 MARCH11A6NNE9 402 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 G3V318 75 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 ARPC1BO15143 372 aaKnown RBP11.85□□□□□ -0.51
SNX13-205ENST00000471744 ATG12O94817 140 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 SERPINE2P07093 398 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
SNX13-205ENST00000471744 PI3P19957 117 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 CD40LGP29965 261 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 RPL8P62917 257 aaKnown RBP11.85□□□□□ -0.51
SNX13-205ENST00000471744 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 OR4A47Q6IF82 309 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 SSX9Q7RTT3 188 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 OR4F17Q8NGA8 305 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 OR5M8Q8NGP6 311 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 MRGPRFQ96AM1 343 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 SPIN2AQ99865 258 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 SPIN2BQ9BPZ2 258 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 C7orf50Q9BRJ6 194 aaKnown RBP11.85□□□□□ -0.51
SNX13-205ENST00000471744 AKIP1Q9NQ31 210 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
SNX13-205ENST00000471744 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 A0A1W2PN81 502 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 CENPXA8MT69 81 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 IGLV1-40P01703 118 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 PSMB8P28062 276 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 CHRNA7P36544 502 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 BAK1Q16611 211 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 LFNGQ8NES3 379 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 PHB2Q99623 299 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 SDHCQ99643 169 aaPredicted RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 SLC25A21Q9BQT8 299 aaPredicted RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 FAM103A1Q9BTL3 118 aaKnown RBP11.84□□□□□ -0.51
SNX13-205ENST00000471744 CCDC32Q9BV29 185 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
SNX13-205ENST00000471744 TEX13DA0A0J9YY54 714 aaPredicted RBP11.83□□□□□ -0.52
SNX13-205ENST00000471744 H3BUA1 57 aa11.83□□□□□ -0.52
SNX13-205ENST00000471744 UPK2O00526 184 aa11.83□□□□□ -0.52
SNX13-205ENST00000471744 IL6RP08887 468 aaPredicted RBP11.83□□□□□ -0.52
SNX13-205ENST00000471744 TSC22D3Q99576 134 aa11.83□□□□□ -0.52
SNX13-205ENST00000471744 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
SNX13-205ENST00000471744 C5orf66Q9H5L9 145 aa11.83□□□□□ -0.52
SNX13-205ENST00000471744 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 ADARB2-AS1A8MUL3 147 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 SNAPC5O75971 98 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 KRASP01116 189 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 PF4V1P10720 104 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 IL7P13232 177 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 HLA-GP17693 338 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 UCP1P25874 307 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 RPL27AP46776 148 aaKnown RBP11.82□□□□□ -0.52
SNX13-205ENST00000471744 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
SNX13-205ENST00000471744 SLC25A42Q86VD7 318 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 SGPP2Q8IWX5 399 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 WDR12Q9GZL7 423 aaKnown RBP11.82□□□□□ -0.52
SNX13-205ENST00000471744 COMMD5Q9GZQ3 224 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 SLA2Q9H6Q3 261 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 NAA60Q9H7X0 242 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
SNX13-205ENST00000471744 MGAM2Q2M2H8 2515 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms