RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 HPRT1P00492 218 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FAM3BP58499 235 aaPredicted RBP11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 HSPB9Q9BQS6 159 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 DTX4Q9Y2E6 619 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 H7C1H1 209 aa11.4□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SRSF6Q13247 344 aaKnown RBP11.4□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 XAF1Q6GPH4 301 aa11.4□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TRGV4A0A0C4DH28 118 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ATP5LO75964 103 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C3orf56Q8N813 242 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SEC11BP0C7V7 166 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 HIST1H4AP62805 103 aaKnown RBP11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 HAPLN4Q86UW8 402 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ATP6V0CP27449 155 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 UNC119Q13432 240 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 OR4D11Q8NGI4 311 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ANGPTL4Q9BY76 406 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FAM206AQ9NX38 181 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 LAMTOR3Q9UHA4 124 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SLC25A15Q9Y619 301 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 IGHV1-69-2A0A0G2JMI3 117 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CTXND1A0A1B0GTU2 59 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CHST5Q9GZS9 411 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TSC2P49815 1807 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 PLXNA1Q9UIW2 1896 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CD33P20138 364 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 EEF1AKMT3Q96AZ1 226 aa11.39□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 IGLV3-16A0A075B6K0 115 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 PEX7O00628 323 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ACSF3Q4G176 576 aaPredicted RBP11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 NEU3Q9UQ49 428 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CRHP06850 196 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 HBBP68871 147 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZIC1Q15915 447 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CYB561D1Q8N8Q1 229 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MEF2CQ06413 473 aaPredicted RBP11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C3orf36Q3SXR2 165 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 A0A1W2PP11 408 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CD69Q07108 199 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 OR10J3Q5JRS4 329 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TRAF4Q9BUZ4 470 aaPredicted RBP11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 LOC102723996A0A087X1L8 192 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FAM209AQ5JX71 171 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FAM168AQ92567 244 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SPSB4Q96A44 273 aa11.38□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MGST3O14880 152 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MOSP00540 346 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FGF9P31371 208 aaPredicted RBP11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 LIPFP07098 398 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MUC1P15941 1255 aaPredicted RBP11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZNF818PQ6ZRF7 136 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 AICDAQ9GZX7 198 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 GSN-AS1Q9NRJ2 163 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ANAPC10Q9UM13 185 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZNF831Q5JPB2 1677 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 P2RY6Q15077 328 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C10orf35Q96D05 121 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FAM74A3Q4VXF1 159 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MRAPQ8TCY5 172 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TRAV8-6A0A0B4J262 113 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C7orf77A4D0Y5 90 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 PEX11BO96011 259 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SRD5A1P18405 259 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 KIAA0040Q15053 153 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 MMD2Q8IY49 270 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ALG14Q96F25 216 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 CEACAM21Q3KPI0 293 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 WFDC12Q8WWY7 111 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 ELF5Q9UKW6 265 aaPredicted RBP11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 OTOGLQ3ZCN5 2332 aa11.37□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 SIGLEC5O15389 551 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 TMEM127O75204 238 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 BIVMQ86UB2 503 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 KBTBD11-OT1A0A1B0GTJ5 212 aa11.36□□□□□ -0.59
NPHP3-ACAD11-201ENST00000471702 FOXH1O75593 365 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms