RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 OR13C8Q8NGS7 320 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 ROPN1LQ96C74 230 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 PHB2Q99623 299 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 C14orf105Q9NVL8 296 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 MRPL16Q9NX20 251 aaKnown RBP3.51□□□□□ -1.85
SMC5-202ENST00000471372 STOML2Q9UJZ1 356 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 ARL5AQ9Y689 179 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 HSPE1-MOB4S4R3N1 261 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 ZNF638Q14966 1978 aaKnown RBP3.51□□□□□ -1.85
SMC5-202ENST00000471372 HECW2Q9P2P5 1572 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 LCTP09848 1927 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 A0A0J9YY10 115 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 TMEM269A0A1B0GVZ9 245 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 A0A1B0GX78 115 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 A0A1W2PNM2 257 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 GRIFINA4D1Z8 144 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 CD5P06127 495 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 RNASE2P10153 161 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 COL8A2P25067 703 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 GNG10P50151 68 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 RBM11P57052 281 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 RWDD2BP57060 319 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 VBP1P61758 197 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 GRK1Q15835 563 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 OR5C1Q8NGR4 320 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 AP3S1Q92572 193 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 CMSS1Q9BQ75 279 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 TMEM222Q9H0R3 208 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 RNASE7Q9H1E1 156 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 CISHQ9NSE2 258 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 PAQR5Q9NXK6 330 aaPredicted RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 ZNF391Q9UJN7 358 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 SAMHD1Q9Y3Z3 626 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 MINOS1-NBL1R4GNA1 71 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 DICER1Q9UPY3 1922 aaKnown RBP3.5□□□□□ -1.85
SMC5-202ENST00000471372 COL1A2P08123 1366 aa3.5□□□□□ -1.85
SMC5-202ENST00000471372 TTC21AQ8NDW8 1320 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 TRAV26-2A0A0B4J265 109 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 I3L521 148 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 UBFD1O14562 309 aaKnown RBP3.49□□□□□ -1.85
SMC5-202ENST00000471372 CDS2O95674 445 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 SERPINA7P05543 415 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 CPMP14384 443 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 MAGEA12P43365 314 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 RAB13P51153 203 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 GLT8D1Q68CQ7 371 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 SSX8Q7RTT4 187 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 ZNF283Q8N7M2 679 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 CLDND2Q8NHS1 167 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 BTF3L4Q96K17 158 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 KIFC1Q9BW19 673 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 PIK3C2GO75747 1445 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 NCOA1Q15788 1441 aa3.49□□□□□ -1.85
SMC5-202ENST00000471372 IGHV3-15A0A0B4J1V0 119 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 TMEM238C9JI98 176 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 OR7C1O76099 320 aaPredicted RBP3.48□□□□□ -1.85
SMC5-202ENST00000471372 IAH1Q2TAA2 248 aaPredicted RBP3.48□□□□□ -1.85
SMC5-202ENST00000471372 TBC1D19Q8N5T2 526 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 LINC00304Q8N9R0 145 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 OR51A2Q8NGJ7 313 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 TSPAN32Q96QS1 320 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 PKMYT1Q99640 499 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 TMEM147Q9BVK8 224 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 NMNAT1Q9HAN9 279 aaPredicted RBP3.48□□□□□ -1.85
SMC5-202ENST00000471372 PRTFDC1Q9NRG1 225 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 FAM32AQ9Y421 112 aaKnown RBP3.48□□□□□ -1.85
SMC5-202ENST00000471372 ITGB4P16144 1822 aa3.48□□□□□ -1.85
SMC5-202ENST00000471372 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 TRBV20OR9-2A0A075B6H5 130 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 hADV38S2A0JD32 116 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 PDE6DO43924 150 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 SRP19P09132 144 aaKnown RBP3.47□□□□□ -1.85
SMC5-202ENST00000471372 ZNF705DP0CH99 300 aaPredicted RBP3.47□□□□□ -1.85
SMC5-202ENST00000471372 GZMBP10144 247 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 DHRS4L2Q6PKH6 230 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 SMARCD3Q6STE5 483 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 Q6ZS49 121 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 FGF13Q92913 245 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 MIEN1Q9BRT3 115 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 WDR61Q9GZS3 305 aaKnown RBP3.47□□□□□ -1.85
SMC5-202ENST00000471372 AICDAQ9GZX7 198 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 ENY2Q9NPA8 101 aa3.47□□□□□ -1.85
SMC5-202ENST00000471372 TXNL4BQ9NX01 149 aaKnown RBP3.47□□□□□ -1.85
SMC5-202ENST00000471372 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 A0A1B0GW54 56 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 FAM159BA6NKW6 160 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 TAS2R20P59543 309 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 POLR2GP62487 172 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMC5-202ENST00000471372 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.46□□□□□ -1.86
SMC5-202ENST00000471372 OR52L1Q8NGH7 329 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 CMTM2Q8TAZ6 248 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 ZNF675Q8TD23 568 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 SMCR5Q8TEV8 140 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 UQCC1Q9NVA1 299 aa3.46□□□□□ -1.86
SMC5-202ENST00000471372 IGLV10-54A0A075B6I4 117 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 H3BPC8 53 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 CRYZL1O95825 349 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms