RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KRASP01116 189 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 FGF2P09038 288 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 FAM157CP0CG43 387 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 RRASP10301 218 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 VAMP1P23763 118 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 LGALS7P47929 136 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 PAX9P55771 341 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 ID3Q02535 119 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 LY6EQ16553 131 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 PRSS8Q16651 343 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 KLK9Q2XQG4 91 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 ABCA11PQ4W5N1 156 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 C4orf46Q504U0 113 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 C10orf55Q5SWW7 151 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 PVRIGQ6DKI7 326 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM86BQ8N661 226 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 OR2T10Q8NGZ9 312 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 R3HDM4Q96D70 268 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 DUX5Q96PT3 197 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 ZNF430Q9H8G1 570 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-207ENST00000471342 ZNF702PQ9H963 129 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM140Q9NV12 185 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 KLK9Q9UKQ9 250 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 PRELID3BQ9Y3B1 194 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 MMP24Q9Y5R2 645 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 DMRT1Q9Y5R6 373 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.16
SF3A1-207ENST00000471342 TRAV14DV4A0A0A6YYC5 116 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 RNF212BA8MTL3 300 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 NBR2O15453 112 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 PLXNB1O43157 2135 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 SLC25A17O43808 307 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 KBTBD11O94819 623 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 SPDEFO95238 335 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 HOXB5P09067 269 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 NQO2P16083 231 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 VDAC1P21796 283 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 VDAC2P45880 294 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-207ENST00000471342 CRIP2P52943 208 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-207ENST00000471342 CX3CL1P78423 397 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 CFHR3Q02985 330 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 CATR1Q13166 79 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 CXorf66Q5JRM2 361 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-207ENST00000471342 LGI3Q8N145 548 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 DMBX1Q8NFW5 382 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 OR5M8Q8NGP6 311 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 ZNF414Q96IQ9 312 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 ST6GAL2Q96JF0 529 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 RNF126Q9BV68 326 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 QTRT1Q9BXR0 403 aaKnown RBP7.8□□□□□ -1.16
SF3A1-207ENST00000471342 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 MGAT4CQ9UBM8 478 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 VPREB3Q9UKI3 123 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
SF3A1-207ENST00000471342 TEX50A0A1B0GTY4 177 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 DUXBA0A1W2PPF3 345 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 FGF16O43320 207 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 DHFRP00374 187 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 HLA-DRB1P01911 266 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 APOA2P02652 100 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
SF3A1-207ENST00000471342 FAM106CPP0CH98 169 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 SLC25A6P12236 298 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 SRD5A1P18405 259 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 OR2B8PP59922 312 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 RRAS2P62070 204 aaPredicted RBP7.79□□□□□ -1.16
SF3A1-207ENST00000471342 RPS16P62249 146 aaKnown RBP7.79□□□□□ -1.16
SF3A1-207ENST00000471342 UBA52P62987 128 aaKnown RBP7.79□□□□□ -1.16
SF3A1-207ENST00000471342 RTL8BQ17RB0 113 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 C19orf35Q6ZS72 473 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 SSX9Q7RTT3 188 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 FOXRED2Q8IWF2 684 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 SSMEM1Q8WWF3 244 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 NDUFA4L2Q9NRX3 87 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 SERTAD4Q9NUC0 356 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 COA4Q9NYJ1 87 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 FOXA2Q9Y261 457 aaPredicted RBP7.79□□□□□ -1.16
SF3A1-207ENST00000471342 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 FAM96BQ9Y3D0 163 aa7.79□□□□□ -1.16
SF3A1-207ENST00000471342 IGLC7A0M8Q6 106 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 C15orf61A6NNL5 157 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 INS-IGF2F8WCM5 200 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 H7C2Y5 167 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 SHOXO15266 292 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 SOX15O60248 233 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 GPR137BO60478 399 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 CREBL2O60519 120 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 TSPAN9O75954 239 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 IGHG2P01859 326 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 SERPINE2P07093 398 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM11P17152 192 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 PPIFP30405 207 aaKnown RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 BRS3P32247 399 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 MFAP2P55001 183 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 KIAA0141Q14154 515 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms