RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ICE1Q9Y2F5 2266 aa4.94□□□□□ -1.62
SMNDC1-204ENST00000471297 CFAP47Q6ZTR5 3102 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 A1L4Q6 167 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 MARCH11A6NNE9 402 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 VWC2LB2RUY7 222 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 BUB1B-PAK6H3BSN5 160 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 TXNL1O43396 289 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 SYNGR2O43760 224 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 CHST1O43916 411 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 IGLV1-47P01700 117 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 GAPDHP04406 335 aaKnown RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 PLA2G2AP14555 144 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 CEACAM3P40198 252 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 RAB13P51153 203 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 LMO4P61968 165 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 ARF6P62330 175 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 POLR2GP62487 172 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 HLA-DRB5Q30154 266 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 MIDNQ504T8 468 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 UTF1Q5T230 341 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 PDPNQ86YL7 162 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 PNKDQ8N490 385 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 OR2C3Q8N628 320 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNF680Q8NEM1 530 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 OR11H6Q8NGC7 330 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 OR52E5Q8NH55 327 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 OR4A16Q8NH70 328 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 CLDND2Q8NHS1 167 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 OSR1Q8TAX0 266 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 LHX4Q969G2 390 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 FLYWCH2Q96CP2 140 aaKnown RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 PHYHIPLQ96FC7 376 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 SMIM8Q96KF7 97 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 CIB3Q96Q77 187 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 NABP2Q9BQ15 211 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 NARFLQ9H6Q4 476 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 UBQLN2Q9UHD9 624 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 WSB1Q9Y6I7 421 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 HIVEP3Q5T1R4 2406 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 KIAA2026Q5HYC2 2103 aa4.93□□□□□ -1.62
SMNDC1-204ENST00000471297 ATMQ13315 3056 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 BORCS7-ASMTA0A0B4J1R7 106 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 IGHV2-70DA0A0C4DH43 119 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 FAM24AA6NFZ4 105 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 LEUTXA8MZ59 168 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 OOSP1A8MZH6 123 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 H0YJW9 148 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 SSSCA1O60232 199 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 JTBO76095 146 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 CRYZL1O95825 349 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 TPT1P13693 172 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 SLC25A16P16260 332 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 ZFP36P26651 326 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 HTR1DP28221 377 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 LGALS7P47929 136 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 LINC00205P59089 165 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 SPCS3P61009 180 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 UBE2KP61086 200 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 RPP30P78346 268 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 PAX2Q02962 417 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 BAXQ07812 192 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 EXOSC2Q13868 293 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 IZUMO4Q1ZYL8 232 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 AARDQ4LEZ3 155 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 EIF5AL1Q6IS14 154 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNF429Q86V71 674 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 TGIF2LXQ8IUE1 241 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 LRRC75A-AS1Q8N1F1 130 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 TMEM252Q8N6L7 170 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 Q8N7P7 452 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 OR4C13Q8NGP0 309 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 OR4A5Q8NH83 315 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 VSTM2AQ8TAG5 236 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 STOML3Q8TAV4 291 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 SCARB1Q8WTV0 552 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 CLCC1Q96S66 551 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 RNF5Q99942 180 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNF471Q9BX82 626 aaPredicted RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 MRPL20Q9BYC9 149 aaKnown RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 LYRM2Q9NU23 88 aaPredicted RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 BEX4Q9NWD9 120 aaPredicted RBP4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 FKBP11Q9NYL4 201 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 BET1LQ9NYM9 111 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 PSENENQ9NZ42 101 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 DPM3Q9P2X0 92 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 HSPB7Q9UBY9 170 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 PRNDQ9UKY0 176 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 WASHC3Q9Y3C0 194 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 INSIG2Q9Y5U4 225 aa4.92□□□□□ -1.62
SMNDC1-204ENST00000471297 ANKHD1Q8IWZ3 2542 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 BSNQ9UPA5 3926 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 MSGN1A6NI15 193 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 LY6LH3BQJ8 138 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms