RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C1QL3Q5VWW1 255 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 CLEC19AQ6UXS0 136 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 MRPL52Q86TS9 123 aaKnown RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 SELENOHQ8IZQ5 122 aaKnown RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB3Q92617 1050 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 UBE2WQ96B02 151 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 MYH11P35749 1972 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 GFRA3O60609 400 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 GALP22466 123 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 UCP2P55851 309 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 C5orf47Q569G3 176 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 HOGA1Q86XE5 327 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 SH3BGRL3Q9H299 93 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 EPDR1Q9UM22 224 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 FOXA2Q9Y261 457 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 SIRT4Q9Y6E7 314 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 NDUFS5O43920 106 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 CA11O75493 328 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 LHBP01229 141 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 MPV17P39210 176 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 SSBP2P81877 361 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 FUT5Q11128 374 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 GTSCR1Q86UQ5 136 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 CHTOPQ9Y3Y2 248 aaKnown RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 IGKV1D-42A0A075B6H8 117 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 TRAV8-1A0A0A6YYK1 113 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 NCR2O95944 276 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 IGHV3-11P01762 117 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 VSIG8P0DPA2 414 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 PAX1P15863 534 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 LINC00615Q96LM1 132 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-210ENST00000471181 GPHA2Q96T91 129 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MGST2Q99735 147 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MRPL32Q9BYC8 188 aaKnown RBP5.9□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF107Q9UII5 783 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MYH3P11055 1940 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MYH8P13535 1937 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 COL4A1P02462 1669 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MYH14Q7Z406 1995 aaKnown RBP5.9□□□□□ -1.46
BRCA1-210ENST00000471181 ITGB1BP1O14713 200 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 CCL4P13236 92 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 TM4SF4P48230 202 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MAJINQ3KP22 176 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 LDLRAD2Q5SZI1 272 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 GAGE2AQ6NT46 116 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 C1orf174Q8IYL3 243 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 GPR146Q96CH1 333 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 ESDP10768 282 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 DEFB104AQ8WTQ1 72 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 GPR132Q9UNW8 380 aa5.9□□□□□ -1.46
BRCA1-210ENST00000471181 MYH6P13533 1939 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 PGLYRP1O75594 196 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-210ENST00000471181 PLNP26678 52 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM186Q96B77 213 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 CDC42EP2O14613 210 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 HOXB3P14651 431 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-210ENST00000471181 CD33P20138 364 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 EVI2AP22794 236 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 GCHFRP30047 84 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 VDAC2P45880 294 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-210ENST00000471181 PCOLCEQ15113 449 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 CYP2G1PQ6ZSU1 146 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 FAM19A2Q8N3H0 131 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM252Q8N6L7 170 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 HMGCLL1Q8TB92 370 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 MZB1Q8WU39 189 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 SERGEFQ9UGK8 458 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 DMRT1Q9Y5R6 373 aa5.9□□□□□ -1.47
BRCA1-210ENST00000471181 MYH7BA7E2Y1 1941 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 TRAV5A0A0B4J249 113 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF79Q15937 498 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 DMKNQ6E0U4 476 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 GGACTQ9BVM4 153 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 SEPSECSQ9HD40 501 aaKnown RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 SELENOKQ9Y6D0 94 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 IGHV3-73A0A0B4J1V6 119 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 KLK8O60259 260 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 CD300CQ08708 224 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 CEACAM21Q3KPI0 293 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 RSPO2Q6UXX9 243 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 FAM57AQ8TBR7 257 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 PDFQ9HBH1 243 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 NUMA1Q14980 2115 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 CEACAM8P31997 349 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 HSPE1P61604 102 aaKnown RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF345Q14585 488 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 PUSL1Q8N0Z8 303 aaKnown RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 FGFRL1Q8N441 504 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF114Q8NC26 417 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 ERG28Q9UKR5 140 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 FBLN7Q53RD9 439 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 C9orf50Q5SZB4 431 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM167AQ8TBQ9 72 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms