RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CDNFQ49AH0 187 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 HACD4Q5VWC8 232 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 LIN54Q6MZP7 749 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 PDPNQ86YL7 162 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 ODF3L1Q8IXM7 274 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 FAM71E2Q8N5Q1 922 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.49□□□□□ -1.69
VARS-222ENST00000470953 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.49□□□□□ -1.69
VARS-222ENST00000470953 FLYWCH2Q96CP2 140 aaKnown RBP4.49□□□□□ -1.69
VARS-222ENST00000470953 ADTRPQ96IZ2 230 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 CLCC1Q96S66 551 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 PHB2Q99623 299 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 HSPB9Q9BQS6 159 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 DCUN1D5Q9BTE7 237 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 CABLES2Q9BTV7 478 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 OR51J1Q9H342 316 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 FBXL15Q9H469 300 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 ZNF355PQ9NSJ1 428 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 METTL1Q9UBP6 276 aaKnown RBP4.49□□□□□ -1.69
VARS-222ENST00000470953 GAB2Q9UQC2 676 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 MRPS7Q9Y2R9 242 aaKnown RBP4.49□□□□□ -1.69
VARS-222ENST00000470953 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
VARS-222ENST00000470953 TRAV18A0A075B6X5 111 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 FOXI3A8MTJ6 420 aaPredicted RBP4.48□□□□□ -1.69
VARS-222ENST00000470953 A8MZ25 164 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 RAB27BO00194 218 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 MPPED1O15442 326 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 NOL3O60936 208 aaKnown RBP4.48□□□□□ -1.69
VARS-222ENST00000470953 TUSC2O75896 110 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 ACTL6BO94805 426 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 DIRAS3O95661 229 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 DHFRP00374 187 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CA2P00918 260 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 ELANEP08246 267 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CTXN2P0C2S0 81 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CLEC2LP0C7M8 214 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CT45A6P0DMU7 189 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CT45A5P0DMU8 189 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CT45A7P0DMV0 189 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 RRASP10301 218 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CD37P11049 281 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 RCVRNP35243 200 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 INSL3P51460 131 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 TMEM50BP56557 158 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 EWSR1Q01844 656 aaKnown RBP eCLIP4.48□□□□□ -1.69
VARS-222ENST00000470953 TMEM267Q0VDI3 215 aaPredicted RBP4.48□□□□□ -1.69
VARS-222ENST00000470953 FHL3Q13643 280 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 VMA21Q3ZAQ7 101 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 UBE2NLQ5JXB2 153 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 TMEM69Q5SWH9 247 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 PYHIN1Q6K0P9 492 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 UNQ5815/PRO19632Q6UWF5 114 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 KCTD9Q7L273 389 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 HAPLN4Q86UW8 402 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 NR2C2APQ86WQ0 139 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 SLC24A4Q8NFF2 622 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 ARPC1AQ92747 370 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 DCSTAMPQ9H295 470 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 RNF167Q9H6Y7 350 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 NUDT15Q9NV35 164 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
VARS-222ENST00000470953 KCNK7Q9Y2U2 307 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 CEPT1Q9Y6K0 416 aa4.48□□□□□ -1.69
VARS-222ENST00000470953 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TRBV6-7A0A0A0MS04 114 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 A0A0A6YYH2 397 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 IGHV7-81A0A0B4J1V7 117 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 IGKV1-6A0A0C4DH72 117 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 HMX3A6NHT5 357 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 A6NJ64 397 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 PCP4L1A6NKN8 68 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 G3V318 75 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TMEM127O75204 238 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SAP30O75446 220 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SLC22A5O76082 557 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 NDUFA3O95167 84 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 IGKV1-16P04430 117 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 IGF1P05019 195 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 FCER2P06734 321 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 OR8U8P0C7N1 319 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ATF4P18848 351 aaPredicted RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 NFYAP23511 347 aaPredicted RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 HTR2BP41595 481 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TPPP2P59282 170 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 FXYD4P59646 89 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SPCS3P61009 180 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 HERV-K104P61576 105 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 CDK10Q15131 360 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ACTBL2Q562R1 376 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 OR2B11Q5JQS5 317 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SAPCD1Q5SSQ6 148 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF660Q6AZW8 331 aaPredicted RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF767PQ75MW2 155 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF429Q86V71 674 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 PPP1R27Q86WC6 154 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TMEM17Q86X19 198 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms