RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 LRRC28Q86X40 367 aaPredicted RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MKXQ8IYA7 352 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 FTMTQ8N4E7 242 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 CCDC54Q8NEL0 328 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 PXT1Q8NFP0 134 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 OR6Q1Q8NGQ2 317 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 OR11L1Q8NGX0 322 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 OR4F5Q8NH21 305 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 OR1L1Q8NH94 360 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 RFESDQ8TAC1 157 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MRPL30Q8TCC3 161 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 HAVCR2Q8TDQ0 301 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 NEK7Q8TDX7 302 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 GTSF1Q8WW33 167 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 C10orf35Q96D05 121 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 DGCR14Q96DF8 476 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 UQCC2Q9BRT2 126 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 TM2D1Q9BX74 207 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 REG4Q9BYZ8 158 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 NXF2Q9GZY0 626 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 CCDC59Q9P031 241 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 OR1A1Q9P1Q5 309 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MLXQ9UH92 298 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 KIF25Q9UIL4 384 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 PEX16Q9Y5Y5 336 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MXRA5Q9NR99 2828 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 C12orf77C9JDV5 145 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 K7N7A8 449 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SDCBPO00560 298 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 PLXNB1O43157 2135 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 NOS1APO75052 506 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 CSN2P05814 226 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ERCC1P07992 297 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SCTP09683 121 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GSTT2P0CG29 244 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GSTT2BP0CG30 244 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GTF2F2P13984 249 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SPNP16150 400 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TUBG1P23258 451 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 PAX7P23759 505 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 COX7A1P24310 79 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 MDH2P40926 338 aaKnown RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GLP1RP43220 463 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 PITPNBP48739 271 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 GNG10P50151 68 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 DLX6P56179 175 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ARF6P62330 175 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 PAX2Q02962 417 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 DIAPH2-AS1Q14236 149 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 MOGQ16653 247 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 MICBQ29980 383 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SMIM21Q3B7S5 101 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 CDNFQ49AH0 187 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 UBE2NLQ5JXB2 153 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TMEM69Q5SWH9 247 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 C1QTNF12Q5T7M4 302 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ELP2Q6IA86 826 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 HCP5Q6MZN7 132 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 CLEC2AQ6UVW9 174 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TRAPPC6BQ86SZ2 158 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TPRA1Q86W33 373 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 C1orf174Q8IYL3 243 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SAXO1Q8IYX7 474 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SPERTQ8NA61 448 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ZSCAN4Q8NAM6 433 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 OR10Z1Q8NGY1 313 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 C22orf15Q8WYQ4 148 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 RAB3CQ96E17 227 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SDSLQ96GA7 329 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 C5orf30Q96GV9 206 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 MYCBPQ99417 103 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 S100A13Q99584 98 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SLC22A4Q9H015 551 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 PATZ1Q9HBE1 687 aaKnown RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 SIRT7Q9NRC8 400 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TUBG2Q9NRH3 451 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TECRQ9NZ01 308 aaKnown RBP2.91□□□□□ -1.94
COL9A1-206ENST00000470652 IL36GQ9NZH8 169 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 ONECUT1Q9UBC0 465 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 Q9UF83 564 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 RAB22AQ9UL26 194 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 POLDIP2Q9Y2S7 368 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 CREBBPQ92793 2442 aa2.91□□□□□ -1.94
COL9A1-206ENST00000470652 TET2Q6N021 2002 aaPredicted RBP2.9□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV3OR16-12A0A075B7B8 117 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MEIKINA0A087WXM9 373 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 TRAV38-1A0A0B4J264 116 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ODAMA1E959 279 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 LRRC30A6NM36 301 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 C15orf65H3BRN8 121 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF701M0R085 212 aaPredicted RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 SH2D1BO14796 132 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 NDUFB3O43676 98 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms