RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 LSM5Q9Y4Y9 91 aaKnown RBP12.17□□□□□ -0.46
COL4A5-203ENST00000470339 ZANQ9Y493 2812 aa12.17□□□□□ -0.46
COL4A5-203ENST00000470339 ABCA1O95477 2261 aa12.17□□□□□ -0.46
COL4A5-203ENST00000470339 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 TRAV40A0A0B4J280 105 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 WRBO00258 174 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 SPDEFO95238 335 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 MOSP00540 346 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 AVPP01185 164 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 IGLV2-23P01705 113 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-203ENST00000470339 DYNLT3P51808 116 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 SPCS3P61009 180 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 TNFRSF9Q07011 255 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 ACOT7LQ6ZUV0 252 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-203ENST00000470339 OR2T10Q8NGZ9 312 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 C11orf1Q9H5F2 150 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 TMEM14BQ9NUH8 114 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-203ENST00000470339 RCL1Q9Y2P8 373 aaKnown RBP12.16□□□□□ -0.46
COL4A5-203ENST00000470339 ZNF257Q9Y2Q1 563 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 TNCP24821 2201 aa12.16□□□□□ -0.46
COL4A5-203ENST00000470339 A0A0D9SG52 128 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 SYNGR2O43760 224 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
COL4A5-203ENST00000470339 KBTBD11O94819 623 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 OR2F2O95006 317 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 CRYGBP07316 175 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 IGHV4-38-2P0DP08 117 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 C4BPBP20851 252 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 NUP62P37198 522 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-203ENST00000470339 P2RY1P47900 373 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 TAS2R30P59541 319 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.46
COL4A5-203ENST00000470339 OR2F1Q13607 317 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 ZNF345Q14585 488 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-203ENST00000470339 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-203ENST00000470339 LAMTOR1Q6IAA8 161 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 TEX29Q8N6K0 151 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 C17orf50Q8WW18 174 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 MFFQ9GZY8 342 aa12.15□□□□□ -0.46
COL4A5-203ENST00000470339 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 ARPC5O15511 151 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 CHST1O43916 411 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 GPR137BO60478 399 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 FAM106CPP0CH98 169 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
COL4A5-203ENST00000470339 PSG5Q15238 335 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 NPBQ8NG41 125 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 GRPEL2Q8TAA5 225 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-203ENST00000470339 RITA1Q96K30 269 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 AQP10Q96PS8 301 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-203ENST00000470339 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
COL4A5-203ENST00000470339 MAGT1Q9H0U3 335 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
COL4A5-203ENST00000470339 L7N2F9 121 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 SSSCA1O60232 199 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 FSHBP01225 129 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 SNRNP70P08621 437 aaKnown RBP12.13□□□□□ -0.47
COL4A5-203ENST00000470339 CXCL2P19875 107 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 MAS1LP35410 378 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 VAMP2P63027 116 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 AANATQ16613 207 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-203ENST00000470339 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 Q8N6K4 173 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 NANPQ8TBE9 248 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 RBKSQ9H477 322 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 FAM96BQ9Y3D0 163 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 FLNAP21333 2647 aaKnown RBP12.13□□□□□ -0.47
COL4A5-203ENST00000470339 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
COL4A5-203ENST00000470339 CSMD1Q96PZ7 3565 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 RRHO14718 337 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 SLC25A17O43808 307 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 NDUFA3O95167 84 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 IFNA17P01571 189 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 FBP1P09467 338 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 PAX9P55771 341 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 OR2B8PP59922 312 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
COL4A5-203ENST00000470339 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms