RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LPCAT3Q6P1A2 487 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 SLC36A1Q7Z2H8 476 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 GLT6D1Q7Z4J2 308 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 UMODL1-AS1Q8N2C9 162 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 PACRGLQ8N7B6 248 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 DAND5Q8N907 189 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 SGMS2Q8NHU3 365 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 RAB2BQ8WUD1 216 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 AP3S1Q92572 193 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 RNASE6Q93091 150 aaKnown RBP1.68□□□□□ -2.14
BRCA2-202ENST00000470094 C12orf43Q96C57 262 aaKnown RBP1.68□□□□□ -2.14
BRCA2-202ENST00000470094 DGCR14Q96DF8 476 aaKnown RBP1.68□□□□□ -2.14
BRCA2-202ENST00000470094 DCUN1D1Q96GG9 259 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 SFRP2Q96HF1 295 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 CAPZA3Q96KX2 299 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 TRIM4Q9C037 500 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 TXNL4BQ9NX01 149 aaKnown RBP1.68□□□□□ -2.14
BRCA2-202ENST00000470094 IDI2-AS1Q9NZ38 188 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 MRPL27Q9P0M9 148 aaKnown RBP1.68□□□□□ -2.14
BRCA2-202ENST00000470094 COQ4Q9Y3A0 265 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 DSCAML1Q8TD84 2053 aa1.68□□□□□ -2.14
BRCA2-202ENST00000470094 ZNF532Q9HCE3 1301 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 IGHV3-15A0A0B4J1V0 119 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 A0A1B0GW54 56 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 OR5K4A6NMS3 321 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 OR11H12B2RN74 326 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 INMT-MINDY4F8WBC2 141 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 COX7A2LO14548 114 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 UBE2L6O14933 153 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CNIH1O95406 144 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 GZMBP10144 247 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CPMP14384 443 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 IDO1P14902 403 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CRHBPP24387 322 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 GNG10P50151 68 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 GTF2A1P52655 376 aaPredicted RBP1.67□□□□□ -2.14
BRCA2-202ENST00000470094 TBPL1P62380 186 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CAV1Q03135 178 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 LIN52Q52LA3 116 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 TEX36Q5VZQ5 186 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 HCP5Q6MZN7 132 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 SPATA12Q7Z6I5 190 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 C20orf196Q8IYI0 205 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CNEP1R1Q8N9A8 125 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 OR51D1Q8NGF3 324 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 OR11H2Q8NH07 326 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 BORCS7Q96B45 105 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 TMEM222Q9H0R3 208 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 CXorf21Q9HAI6 301 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 GPR84Q9NQS5 396 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 DOK5Q9P104 306 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 AK3Q9UIJ7 227 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 PRELID3BQ9Y3B1 194 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 NUP155O75694 1391 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 MTUS2Q5JR59 1369 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 REREQ9P2R6 1566 aa1.67□□□□□ -2.14
BRCA2-202ENST00000470094 A0A087WUU8 490 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 E7EQL1 145 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 H3BPC8 53 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 FAAHO00519 579 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 OR7C1O76099 320 aaPredicted RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 OR4E1P0C645 316 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 FGF6P10767 208 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 GABRA2P47869 451 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 ZNF140P52738 457 aaPredicted RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 RBM11P57052 281 aaKnown RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 TAS2R30P59541 319 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 SNRPD2P62316 118 aaKnown RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 RUNX1Q01196 453 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 FABP9Q0Z7S8 132 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 KRR1Q13601 381 aaKnown RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 POU6F1Q14863 301 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 TAF1AQ15573 450 aaPredicted RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 TNFAIP8L3Q5GJ75 292 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 TCF24Q7RTU0 167 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 TMED4Q7Z7H5 227 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 SLC22A24Q8N4F4 322 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 OR5C1Q8NGR4 320 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 RPS4Y2Q8TD47 263 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 ROPN1LQ96C74 230 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 BTF3L4Q96K17 158 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 SIGMAR1Q99720 223 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 NIPSNAP1Q9BPW8 284 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 NMNAT1Q9HAN9 279 aaPredicted RBP1.66□□□□□ -2.14
BRCA2-202ENST00000470094 ARMC1Q9NVT9 282 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 PRELID1Q9Y255 219 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 ANGPT4Q9Y264 503 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 MINOS1-NBL1R4GNA1 71 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 PBRM1Q86U86 1689 aa1.66□□□□□ -2.14
BRCA2-202ENST00000470094 HECW2Q9P2P5 1572 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 MDFIC2A0A1B0GVS7 189 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 VPS37CA5D8V6 355 aaPredicted RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 SDHAF1A6NFY7 115 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 FAM159BA6NKW6 160 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 LST1O00453 97 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 UBFD1O14562 309 aaKnown RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 ZNF73O43830 326 aaPredicted RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 KLRC4O43908 158 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 RPL27AP46776 148 aaKnown RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 FOXF1Q12946 379 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms